CF832328

Overview
NameCF832328
Unique NameCF832328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:974..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.109e-49
Identity = 91/187 (48.66%), Postives = 125/187 (66.84%), Query Frame = -1
Query:  280 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW-SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTG 837
            Y+C    +QDTLY HS RQFY  C + GT+DFIFG+AA VFQ C I  R+P  NQ N +TAQG+ DPNQ++G+ IQ+C I A  +++A      TYLGRPWK +S TV+M++ I  V+ P+GW  W SG     ++ Y EY+NTG G+D + RVKW+ +K + S AEA  +T A  + G+ W+ +TG
Sbjct:  399 YQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 2.359e-48
Identity = 95/195 (48.72%), Postives = 116/195 (59.49%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS-GNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWLGSTGFPFSLGL 837
            Y C +  YQDTLYVH+ RQFY  C I GTVDFIFGN  AV QNC +  R+P  NQ  MVTAQGR +P Q   IV+Q C I   +D  ++    +TYLGRPWK YSRT++MQS I   I P GW  W+  NF  DT +YAEYQN G GA    R+ W  F+   +   AQ +TA  +I     WL     P+  G+
Sbjct:  177 YNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.449e-47
Identity = 91/185 (49.19%), Postives = 117/185 (63.24%), Query Frame = -1
Query:  292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF--ALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAG-STWL 837
            YRC    YQDTLY HS RQ+Y +C + GTVDFIFG    VFQ C I  R+P PNQ N +TA+G  + NQNTGI I +C I    ++ A      TYLGRPWK +S+TV+MQS I   +NPAGW  W+  +     T+FY EY+N+G G+D S RVKW+ +K I+S  EA  +T   F+ G   W+
Sbjct:  779 YRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 8.684e-43
Identity = 87/192 (45.31%), Postives = 114/192 (59.38%), Query Frame = -1
Query:  283 CDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI-----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLL----AVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGST 831
            C+ L  QDTLY HSLRQFY  C I G VDFIFGN+AAVFQ+CDI     H++       N +TA GR D +Q+TG V   C I  T + +    A     + +LGRPWK +SRTV +  ++  +I+P GW  W+G+FAL TL+Y EY+NTG G+  S+RV WS+            Y+ ANFI    W  +T
Sbjct:  413 CEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.684e-43
Identity = 88/187 (47.06%), Postives = 113/187 (60.43%), Query Frame = -1
Query:  295 CDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI----HARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGS----FETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTW 831
            C+ L  QDTLY H LRQFY +C I G VDFIFGN+AAVFQ+C+I        P   ++N VTAQGR DP+Q+TG V   C I  T + + +  +     + +LGRPWK YSRTV +  ++  +I P GW  WSG+FAL TL+Y E +NTG G+D S RV WS+            Y+ ANFI    W
Sbjct:  363 CEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.629e-42
Identity = 85/164 (51.83%), Postives = 106/164 (64.63%), Query Frame = -1
Query:  355 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQR-NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVI 837
            YRC +  YQDTLY  +LRQFY  C I GT+DFIFGNAAAVFQ+C+I  RRP+  +  N++ A GR D  QNTG  +  CRI   SDL  VK  + +YLGRPW++YSR +VM+S I D I   GW  W  SG+  L TL++ E++N G  A  S RV W  F  I
Sbjct:  316 YRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.638e-41
Identity = 86/194 (44.33%), Postives = 117/194 (60.31%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDD-PNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI    +L A K + ++YLGRPWK+++ TV++ ++I D+I P GW EW G     T  Y E+ N G GA T+ R  W   KV  SAAE +TYT AN++  + W+     P  LGL
Sbjct:  397 FNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.386e-40
Identity = 87/194 (44.85%), Postives = 113/194 (58.25%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDP-NQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ N  Q N VTA G +       GIV+Q CRI     L A +   E+YLGRPWK++S TV++ S+I DVI P GW  W G     +  Y EY N G GA T+ RV W   K+  SAAE   +T AN++    W+     P +LGL
Sbjct:  404 FNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.811e-40
Identity = 86/197 (43.65%), Postives = 111/197 (56.35%), Query Frame = -1
Query:  262 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTA-----ANFIAGSTWLGSTGFPFSLG 837
            Y C M  +QDTLYV S RQFY  C I+GT+DF+FG    VFQNC +  R P   Q+ +VTA GR+  N  + +V Q         L +V     +YLGRPWK+YS+ V+M S I  +  P G+  W G+   +T  Y EY N G GADT+ RVKW   KV+TS   A+ Y        N  A  TW+  +G P+SLG
Sbjct:  250 YNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAEYYPGKFFEIVNATARDTWIVKSGVPYSLG 445          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.088e-40
Identity = 84/194 (43.30%), Postives = 118/194 (60.82%), Query Frame = -1
Query:  259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837
            + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+ N G GA+T+ RV W+  K+  SAAE + +T AN++  + W+     P  LGL
Sbjct:  393 FNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584          
The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME1_ARATH8.109e-4948.66Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME_PETIN2.359e-4848.72Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]
PME26_ARATH4.449e-4749.19Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME64_ARATH8.684e-4345.31Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME51_ARATH8.684e-4347.06Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME54_ARATH5.629e-4251.83Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME37_ARATH1.638e-4144.33Probable pectinesterase/pectinesterase inhibitor V... [more]
PME5_ARATH1.386e-4044.85Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_MEDSA1.811e-4043.65Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME_BRANA3.088e-4043.30Probable pectinesterase/pectinesterase inhibitor O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTCAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGTATGCTAGCATGTCACACCTATA
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