CF832328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 4.034e-40 Identity = 84/194 (43.30%), Postives = 114/194 (58.76%), Query Frame = -1 Query: 259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRD-DPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837 + C YQDTLYV++ RQFY +C+++GTVDFIFG +A V QN I R+ + Q N VTA G + GIV+Q CRI L + + TYLGRPWK++S TV+M +++ D+I P GW W G + Y EY N G GA + RV W+ KV SAAE +TAAN++ W+ P ++GL Sbjct: 397 FNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.435e-37 Identity = 81/194 (41.75%), Postives = 115/194 (59.28%), Query Frame = -1 Query: 259 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLGL 837 + C YQDTLYV++ RQFY + +++GTVDFI G +A V QN I R+ +P Q N VTA G+ GIV+ CRI A +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G T Y E+ N G GA+ + RV W+ K+ SAAE + +T AN++ + W+ LGL Sbjct: 380 FNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 4.615e-36 Identity = 71/123 (57.72%), Postives = 88/123 (71.54%), Query Frame = -1 Query: 469 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGW 837 YRC + AYQDTLY +S RQFY C I GTVDFIFG AAAVFQ C I AR+P Q N++TAQ R++ +G QKC I A+SDL +KG+ +T+LGRPW+ +SR V M+S I DVI+ AGW Sbjct: 164 YRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 8.430e-30 Identity = 71/182 (39.01%), Postives = 101/182 (55.49%), Query Frame = -1 Query: 292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837 + C ML QDTLY H R +Y C I G+VDFIFGNA ++++ C +HA ++ VTAQGR ++TG KC++ T L YLGR W +SR V + + ++I P GWY W T+FY +Y+ TGAGA+ RV W+ + +T EA+ + + FI GS W+ Sbjct: 215 FGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHAIA---DKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.346e-27 Identity = 64/182 (35.16%), Postives = 96/182 (52.75%), Query Frame = -1 Query: 292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837 Y C + +YQDTL + ++ +C I G DFI G+A+++++ C +H+ PN +TAQ R + +G C++ GS T+LGRPW YSR V S S+V+ P GW +W + +T++Y EY+ G GAD RV+WS S EA + + +FI G WL Sbjct: 166 YGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWSK---QLSDEEATVFLSKDFIGGKDWL 332
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.260e-25 Identity = 65/182 (35.71%), Postives = 89/182 (48.90%), Query Frame = -1 Query: 292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837 YR +L QDTL+ + ++ C I G VDFIFGNA +++Q+CDIH+ + + A RD ++TG C I T + YLGR W YSRTV I+D+I P GW +W + + EY G GA+ RV WS K +T E + + FI G WL Sbjct: 212 YRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.260e-25 Identity = 68/185 (36.76%), Postives = 87/185 (47.03%), Query Frame = -1 Query: 271 YQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPF 816 +QDTLY R +Y C+I+G +DFIFG A ++F+ C + R P +TAQGRD P G V + C V GS + LGR WK YSR + +S SD I P GW W + + E+ TG GADTS RV W T S + +T FI WL F Sbjct: 167 FQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC---------TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPWLT---KASEKDVLQFTNLTFIDEEGWLSRLPIKF 339
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 3.103e-24 Identity = 62/187 (33.16%), Postives = 97/187 (51.87%), Query Frame = -1 Query: 286 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGS 837 Y CD L QDT++ + R + +C I G +DFIFG+ +V+++C I+A + +TAQGR + +G V + +V GS YLGR + +SR + +Q+D+S V++P GWY W + YAE + GAG+D S RV W + S Q ++ +NFI W+ + Sbjct: 114 YNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPW--IDKLHSFYTKQQFSISNFIDQDQWISN 289
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.431e-23 Identity = 60/182 (32.97%), Postives = 92/182 (50.55%), Query Frame = -1 Query: 292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837 Y C QDTL R F+ C I G++DFIFGN +++++C +H+ N +TA G+D TG V C+I GS +LGR W+ Y+R + ++ +S V++ GW + T++Y E++ G GA+ S RV T+ + S EA +T +FI G WL Sbjct: 165 YGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHRCYGPGANHSKRV---TYAKLLSDVEAAPFTNISFIDGEEWL 333
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 4.480e-23 Identity = 65/187 (34.76%), Postives = 94/187 (50.27%), Query Frame = -1 Query: 292 CDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI--HARRPNPNQRNM---VTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAAN--FIAGSTWL 831 C QDTL+ R ++ C I G++DFIFGNA +++Q+C I A + +P + + VTA GR ++N+G C IG T + +LGR W+ YSR V + + ++DVI P GW ++ T+FY EY +G GAD S R + + E Q N FI G WL Sbjct: 216 CGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAPY-----VQKLNETQVALLINTSFIDGDQWL 388 The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 86
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bpback to top |