CF832328

Overview
NameCF832328
Unique NameCF832328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:974..1810. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.643e-23
Identity = 62/184 (33.70%), Postives = 90/184 (48.91%), Query Frame = -1
Query:  292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837
            Y       QDTL+    R ++  C I G VDFI G+  +++Q+C I     +  P     +TAQGR + N   G V   C          V G  + YLGR W+ YSR +   S+++DV++P GW+EW+       L YAE+   G+G++TS R KW       SA+  Q     +FI    W+
Sbjct:  152 YSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWVK---KLSASAVQHLADLSFINRGGWV 323          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.224e-22
Identity = 55/156 (35.26%), Postives = 80/156 (51.28%), Query Frame = -1
Query:  370 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWS 837
            Y C  L +QDTLY+H  +Q+   C I G+VDFIFGN+ A+ ++C IH +      +  +TAQ R    ++TG V  +C I           S   YLGRPW  + R V+  + +   I   GW+ W       +  + EY+  G G+ +S RV WS
Sbjct:  135 YNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNWGNAENERSACFYEYRCFGPGSCSSERVPWS 279          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.904e-22
Identity = 62/187 (33.16%), Postives = 91/187 (48.66%), Query Frame = -1
Query:  283 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGST 837
            Y C     QDTL     R F+  C I G++DFIFGN  +++Q+C I+  A+         +TAQGR   ++ +G     C+I          GS E  LGR W  Y+  V   + +S +I P GW  W  +    T+ + E++  G GAD   RV +   K +T  +EA ++   +FI G  WL  T
Sbjct:  214 YGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKID---------GSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVLFG--KQLTD-SEASSFIDVSFIDGDEWLRHT 388          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.211e-21
Identity = 61/190 (32.11%), Postives = 91/190 (47.89%), Query Frame = -1
Query:  274 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR--RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFP 837
            Y       QDTL+    R ++  C I G VDFIFG   +++Q+C I     +  P     +TAQGR +P    G +   C          V G+   +LGRPW+ YSR +   S+++DV+ P GW  W+     + L +AE+   G+GA+   RVKW   K ++ +A  Q     +FI    W+     P
Sbjct:  157 YSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKW--VKKLSESA-IQNLADLSFINRGGWVEDLPIP 334          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.194e-21
Identity = 59/185 (31.89%), Postives = 95/185 (51.35%), Query Frame = -1
Query:  292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837
            Y C   +  +TL+ +  R +Y  C I G++DFIFG A ++F NC+I     +R  P     +TA  R+   + TG V  + +         V G  E YLGR    YSR +  ++ +S  + P GW  WS + +   L++ EY+  G GA+   R  W+  K +T   E +++ + +FI G++WL
Sbjct:  166 YHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPY--GSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYKCHGPGAERQKRSDWA--KDLTK-QEVESFLSIDFIDGTSWL 336          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21
Identity = 59/150 (39.33%), Postives = 81/150 (54.00%), Query Frame = -1
Query:  394 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 837
            Y C+   YQDTL   +  Q Y +  I G VDFIFG +A A FQN DI      P   + +TA GR      +  VI K  + A       +G++  YLGRPW  Y+R V  Q+ +++VIN  GW EWS +    + + + EY NTGAG++
Sbjct:  153 YGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTGAGSE 298          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.550e-20
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = -1
Query:  394 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFA-LDTLFYAEYQNTGAGAD 837
            Y C    YQDTL   +  Q Y    I G VDFIFG +A A F  CDI      P+  + +TA GR   + ++  VI K  + A        G++  YLGRPW +Y+R    ++ ++DVIN  GW EWS +    + + + EY NTG GA+
Sbjct:  152 YACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGAE 297          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.762e-19
Identity = 56/182 (30.77%), Postives = 84/182 (46.15%), Query Frame = -1
Query:  292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837
            Y C    +QDTL       F+  C I GT DFIFG  A+++ N  +HA     +   ++TAQGR    +  G     C++  T   +        YLGR W  + + V   ++++ V+NP+GW E        T+FY EY+  G G+    RV ++         E   +    +I GSTWL
Sbjct:  188 YSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYKCFGPGSHLEKRVPYTQ---DIDKNEVTPFLTLGYIKGSTWL 355          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME66_ARATH (Probable pectinesterase 66 OS=Arabidopsis thaliana GN=PME66 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.301e-19
Identity = 63/187 (33.69%), Postives = 88/187 (47.06%), Query Frame = -1
Query:  262 QDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWLGSTGFPFSLG 813
            QDTL+    R +Y  CII+G +DFIFG   ++F+ C ++         N    +TA  R  P+   G V   C          V G  +T LGR W   +R +  +S +SDV+ P GW  W        L + E   TGAGADTS RV W   K + S +E   + + +FI    W+  + FP   G
Sbjct:  163 QDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKECTLNMTLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDC---------TVTGVGKTLLGRAWGSNARVIFDRSRLSDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPW--LKKL-SLSEVDGFASVSFIDQDGWI--SRFPIEGG 335          
BLAST of CF832328 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.668e-18
Identity = 53/182 (29.12%), Postives = 86/182 (47.25%), Query Frame = -1
Query:  292 YRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQNTGAGADTSNRVKWSTFKVITSAAEAQTYTAANFIAGSTWL 837
            Y C    YQDT+   +   F+  C I GT DFIFG+  +++    ++      +   ++TA       + +G     C++  T   +        YLGR W  + + V   +D+S V+NP+GW E        T+FY EY+ TG G+    RVK++         EA+ + +  +I GS+WL
Sbjct:  165 YNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNV---VGDGIRVITAHAGKSAAEKSGYSFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGRDKTVFYGEYKCTGTGSHKEKRVKYTQ---DIDDIEAKYFISLGYIQGSSWL 332          
The following BLAST results are available for this feature:
BLAST of CF832328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
PME55_ARATH7.643e-2333.70Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME31_ARATH2.224e-2235.26Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME15_ARATH2.904e-2233.16Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME29_ARATH3.211e-2132.11Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME67_ARATH4.194e-2131.89Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME_ASPAC9.342e-2139.33Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME_ASPTU3.550e-2038.00Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME50_ARATH1.762e-1930.77Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME66_ARATH2.301e-1933.69Probable pectinesterase 66 OS=Arabidopsis thaliana... [more]
PME63_ARATH5.668e-1829.12Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832328 ID=CF832328; Name=CF832328; organism=Citrus sinensis; type=EST; length=837bp
TTTTTTTTTTTTTTAAGCTCAATCAGCAGTAGTACTTTAATTTCAGGGAG
CAACGCATGCAATCATCATCCATAATTCCCTGCTGAGATAAATCTCTTAC
ATCAAACTCGAGCAGACTCACACAAATAAAATCATCAAACTTGAGCAGAC
TCGCACAAATAAAATCATCAAACATCTAGCGGAGCAAGTGTTATTTATTG
CTAGCTAGGACATTTATAGGCAGCTGAGCTTAGCTATGGCCTATGTATGA
CAAATTCACAGACCAAGAGAGAAAGGAAACCCAGTGGAGCCAAGCCAAGT
ACTCCCTGCAATAAAATTCGCAGCTGTATAAGTTTGAGCCTCAGCTGCAC
TAGTAATCACCTTGAATGTGCTCCATTTCACCCTATTCGATGTGTCAGCA
CCAGCACCTGTGTTTTGATACTCTGCATAAAACAATGTGTCCAATGCAAA
ATTCCCACTCCATTCATACCACCCAGCTGGGTTAATAACATCACTTATAT
CAGATTGCATCACAACAGTCCTCGAGTACCGCTTCCATGGCCTGCCTAAA
TATGTCTCAAAGCTGCCCTTTACAGCAAGTAAATCTGATGTTGCACCAAT
CCTGCATTTTTGTATCACTATGCCTGTGTTCTGATTCGGGTCGTCGCGGC
CTTGTGCCGTGACCATGTTCCTTTGGTTTGGATTGGGGCGGCGAGCATGG
ATGTCACAGTTTTGGAACACAGCTGCTGCATTTCCGAAAATGAAGTCCAC
TGTGCCTGCTATAATGCAGCTGGTATAAAATTGGCGAAGTGAGTGTACAT
AGAGAGTGTCTTGGTATGCTAGCATGTCACACCTATA
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