CF832329

Overview
NameCF832329
Unique NameCF832329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 6.175e-69
Identity = 130/221 (58.82%), Postives = 155/221 (70.14%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + VEV  +K+NL              S N VDGSTTF+SAT+A VG GF+ +DI  QNTAGP+KHQAVALRVG+D S   RC + AYQDTLY HS RQFY    + GT+DFIFGNAA VFQ C + AR+P   Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   F TYLGRPWK+YSRTVVM+S +  +I+P+GW EW G+FAL TL+Y E+
Sbjct:  275 YKENVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEF 495          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 8.065e-69
Identity = 128/221 (57.92%), Postives = 152/221 (68.78%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V + K K  L              +RN VDG TTFNSAT AV    F+A ++TF+NTAGP KHQAVA+R  +DLS FY C   AYQDTLY HSLRQFY  C I GTVDFIFGNAA VFQ+C+++ R+P  NQ N +TAQGR DPNQNTGI I  C I    DL++   + +TYLGRPWK YSRTV MQS I +V+ P GW EW+G+FAL TL+YAEY
Sbjct:  299 YEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEY 519          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 4.003e-68
Identity = 120/221 (54.30%), Postives = 160/221 (72.40%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + +E+P++K  + F            +R+  DG T F+SATV V G GF+A+D++F N AGP KHQAVALR  SDLSA+YRC   +YQDT+YVHS +QFY  C I GTVDFIFG+A+ VFQNC ++ARRPNPNQ+ + TAQGR++  + TGI I   RI A  DL+ V+ +F+ YLGRPW+ YSRTV+M+S I D+++PAGW +W  +FAL+TL+Y EY
Sbjct:  245 YFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEY 465          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.165e-67
Identity = 122/219 (55.71%), Postives = 154/219 (70.32%), Query Frame = 1
Query:    7 KTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            + ++V +KK NL F             ++  D  TTF++AT A  G GF+ RD+TF+N AGP+KHQAVALRVG D +  YRC+++ YQD LYVHS RQF+  C I GTVDFIFGNAA + Q+C+I+AR+P   Q+  +TAQ R DPNQNTGI I  C++ AT DL A KGS+ TYLGRPWK YSR V M SD+ D I+P GW EW+G FALD+L+Y EY
Sbjct:  314 ENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEY 532          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 7.549e-67
Identity = 130/221 (58.82%), Postives = 153/221 (69.23%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V V KKK+NL              S N VDGST F S T+A VG GF+ +DI  QNTAGP K QAVALRVG+D+S   RC + AYQDTLY HS RQFY    + GTVDFIFGNAA VFQ C I AR+PN  Q+NMVTAQGR DPNQ TG  IQ C I A+ DL  V   ++TYLGRPWK++SRTVVMQS +   I+P+GW+EW G+FAL TL+Y E+
Sbjct:  270 YKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDGST-FPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEF 489          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 252.677 bits (644), Expect = 1.288e-66
Identity = 123/217 (56.68%), Postives = 152/217 (70.05%), Query Frame = 1
Query:   13 VEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            ++V +KKINL F             ++  D  TTF++A+ A  G GF+ARDITF+N AGP+KHQAVALR+G+D +  YRC+++ YQDTLYVHS RQF+  C I GTVDFIFGNAA V QNC I+AR+P   Q+N +TAQ R DPNQNTGI I   R+ A SDL A  GS +TYLGRPWK +SRTV M S I   ++  GW EW+  FALDTL+Y EY
Sbjct:  327 LKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEY 543          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.346e-66
Identity = 120/221 (54.30%), Postives = 156/221 (70.59%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + VE+PKKK  + F            +R+ +DG +TF + TV V G G++A+DI+F N+AGP+K QAVA R GSD SAFYRC+   YQDTLYVHS +QFY  C I GT+DFIFGNAA VFQN  ++AR+PNP  +   TAQ R+  +Q TGI I  CRI A  DL+ VK +F+ YLGRPW++YSRTV+++S I D+I+PAGW E   +FAL+TL+Y EY
Sbjct:  259 YFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEY 479          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 249.98 bits (637), Expect = 8.346e-66
Identity = 125/221 (56.56%), Postives = 146/221 (66.06%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + VEVPK K  +              +R+ VDG TTFNSAT  + G  F+  +IT +NTAGP+K QAVALR G DLS FY C   AYQDTLY HSLRQFY  C + GTVDFIFGNAA V QNC+++ R+P   Q N VTAQGR DPNQNTG  I  C I    DL     + +TYLGRPWK YSRTVVMQ+ I   + P+GW  WSG+FAL TL+YAEY
Sbjct:  286 YEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEY 506          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.410e-65
Identity = 125/221 (56.56%), Postives = 146/221 (66.06%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + +++ KKK N+               RN + G TTF +ATVAV G GF+A+DITF+NTAGP   QAVALRV SD SAFYRC +  YQDTLY HSLRQFY  C I GT+DFIFGN AAV QNC I+ R P P Q+  +TAQGR  PNQNTG VIQ   + AT           TYLGRPWK YSRTV M + +S ++ P GW EW GNFALDTL+Y EY
Sbjct:  278 YKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEY 489          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.740e-63
Identity = 119/221 (53.85%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y++ V V K K N+                N +DG+ TF +AT AV G GF+ARD+ F NTAGP+KHQAVAL V +DLS FY+C M A+QDT+Y H+ RQFY  C+I GTVDFIFGNAA VFQ C+I  RRP   Q+N +TAQGR DPNQNTGI I  C I    +L  +    +T+LGRPWK +S TV+M+S +   INP GW  W+G+ A DT+FYAEY
Sbjct:  295 YLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDI----QTFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEY 511          
The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME21_SOLLC6.175e-6958.82Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME41_ARATH8.065e-6957.92Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME40_ARATH4.003e-6854.30Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME61_ARATH1.165e-6755.71Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_SOLLC7.549e-6758.82Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME34_ARATH1.288e-6656.68Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH8.346e-6654.30Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH8.346e-6656.56Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME22_ARATH5.410e-6556.56Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME46_ARATH1.740e-6353.85Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bp
TACATAAAAACTGTGGAGGTGCCGAAGAAGAAAATTAATCTTAAGTTTAT
TGGATATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGAGGTTG
ATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGGA
TTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAACA
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCAA
TTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAAA
TGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAATC
CAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCAG
AACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATTT
ACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAGC
GGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAAC
CCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTT
TTATGCAGAGTATCAAAA
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