CF832329

Overview
NameCF832329
Unique NameCF832329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:731..1398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 2.273e-63
Identity = 122/221 (55.20%), Postives = 146/221 (66.06%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + + +P K+ N+              SR+   G TT+ +ATVA +G+GF+ARD+TF N AGP   QAVALRVG+D S  +RC +  YQD+LY HS RQFY    I GTVDFIFGN+A VFQ+C+I AR+P P QRN VTAQGR +P QNTGI IQ CRI A S          TYLGRPWK YSRTVVMQS I   I+P+GW  WSG F L +LFY EY
Sbjct:  252 YHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEY 463          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.598e-62
Identity = 120/222 (54.05%), Postives = 146/222 (65.77%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+V KK  N+                N +DG+ TF +AT AV G GF+ARD+ F NTAGPSKHQAVAL V +DL+AFYRC M AYQDTLYVH+ RQFY  C I GTVDFIFGN+A+V Q+C I  RRP   Q+N +TAQGR DPN NTGI I +C I    DL  V     T+LGRPWK +S TV+M S +   I+  GW  W+G+ A DT+FY EY+
Sbjct:  293 YFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYK 510          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.127e-61
Identity = 120/223 (53.81%), Postives = 145/223 (65.02%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNF-ALDTLFYAEYQ 666
            Y++ +++ K   N+              SRN +DG+ TF +AT AV G GF+A+DI F N AG SKHQAVALR GSD S F+RC    +QDTLY HS RQFY  C I GT+DFIFGNAA VFQ+C I  R+P PNQ N +TAQG+ DPNQNTGI+IQK  I    + L       TYLGRPWK +S TV+MQSDI  ++NP GW  W  N     T+FYAEYQ
Sbjct:  311 YVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGNNLTA----PTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQ 529          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.127e-61
Identity = 115/222 (51.80%), Postives = 147/222 (66.22%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+V +   +L F            S++  DG TT+ +ATVA+VGD F+A++I F+NTAG  KHQAVA+RV +D S FY C    YQDTLY HS RQFY  C I+GT+DF+FG+AAAVFQNC +  R+P  NQ   +TA GR DP ++TG V+Q C I    D LAVK   +TYLGRPWK YSRT++M + I D + P GW  W G F L+TLFY+E Q
Sbjct:  290 YKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQ 511          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.629e-61
Identity = 114/222 (51.35%), Postives = 147/222 (66.22%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+V K   +L F            ++N  DG TT+ +ATVA+VG+ F+A++I F+NTAG  KHQAVA+RV SD S F+ C    YQDTLY HS RQF+  C I+GT+DF+FG+AAAVFQNC +  R+P PNQ   +TA GR DP ++TG V Q C I    D LAVK + + YLGRPWK YSRT++M + I D + P GW  W G+F L TLFY+E Q
Sbjct:  293 YKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQ 514          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 4.739e-61
Identity = 114/221 (51.58%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + +++P  K N+              +R+  DG TTF SAT+AV G+GFLARDI   NTAGP KHQAVALRV +D  A YRC +  YQDTLY HS RQFY  C I GT+D+IFGNAA VFQ C+I ++ P P Q  ++TAQ RD  +++TGI +Q C I A+ DL       ++YLGRPW+ +SRTVVM+S I + I+ +GW +W+G  ALDTL+Y EY
Sbjct:  275 YDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEY 495          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.056e-60
Identity = 121/221 (54.75%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + + +P K+ N+              SR+   G  T+ SATVA +GDGF+ARDITF N+AGP+  QAVALRVGSD S  YRC +  YQD+LY  S RQFY    I GTVDFIFGN+A VFQ+C++ +R+ + +Q N VTAQGR DPNQNTGI I  CRI          GS +TYLGRPWK+YSRTVVMQS I   I+P+GW  WS NFAL TL+Y E+
Sbjct:  265 YKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEF 475          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.072e-60
Identity = 113/221 (51.13%), Postives = 145/221 (65.61%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V + K   N+              +RN  DG+TTF SAT AV G+GF+A+ ITF+NTAGP KHQAVALR  SD S FY C    YQDTLY+HS RQF  +C I GTVDFIFG+A A+ QNC+I+AR+P   Q+N +TAQ R +P++ TG VIQ   +   S         ETYLGRPW+ +SRTV M+ ++  +++PAGW  WSG+FAL TL+Y EY
Sbjct:  290 YRENVVIKKSIKNVMVIGDGIDSTIVTGNRNVQDGTTTFRSATFAVSGNGFIAQGITFENTAGPEKHQAVALRSSSDFSVFYACSFKGYQDTLYLHSSRQFLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATAS---------ETYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEY 501          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.240e-60
Identity = 112/223 (50.22%), Postives = 149/223 (66.82%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGST-TFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V+V KK  ++ F            S N   G   T+ +ATVA+ GD F A++I F+NTAGP  HQAVALRV +DL+ FY C +  YQDTLYVHS RQF+  C ++GTVDFIFG+   V QNC+I  R+P  +Q  M+TAQGR D  ++TG+V+Q C I      + VK   + YLGRPWK +SRT++M + I DVI+PAGW  W+G+FAL+TL+YAEY+
Sbjct:  297 YNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYE 519          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.525e-59
Identity = 116/195 (59.49%), Postives = 139/195 (71.28%), Query Frame = 1
Query:   88 RNEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW--SGNFALDTLFYAEYQ 666
            R+   G TT+NSAT  + G  F+A+ ITF+NTAGP+K QAVALR  SDLS FY+C +  YQDTL VHS RQFY  C I GTVDFIFGNAAAVFQNC I  RRP   Q N++TAQGR DP QNTGI I   RI    DL  V G+ +TY+GRPW ++SRTVV+Q+ + +V++P GW  W     F LDTLFYAEY+
Sbjct:  290 RSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRILPAPDLKPVVGTVKTYMGRPWMKFSRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYK 484          
The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME16_ARATH2.273e-6355.20Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME24_ARATH5.598e-6254.05Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME3_PHAVU2.127e-6153.81Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME28_ARATH2.127e-6151.80Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME21_ARATH3.629e-6151.35Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH4.739e-6151.58Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME35_ARATH1.056e-6054.75Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME6_ARATH3.072e-6051.13Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME58_ARATH5.240e-6050.22Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME59_ARATH1.525e-5959.49Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bp
TACATAAAAACTGTGGAGGTGCCGAAGAAGAAAATTAATCTTAAGTTTAT
TGGATATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGAGGTTG
ATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGGA
TTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAACA
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCAA
TTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAAA
TGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAATC
CAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCAG
AACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATTT
ACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAGC
GGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAAC
CCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTT
TTATGCAGAGTATCAAAA
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