CF832329

Overview
NameCF832329
Unique NameCF832329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:731..1398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.532e-43
Identity = 95/224 (42.41%), Postives = 130/224 (58.04%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEV--DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRD-DPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V +PKKK N+              +R+     G+TT  SATV V  +GF+A+ + F+NTAGP  HQA A+RV  D +  + C    YQDTLYV++ RQFY +C+++GTVDFIFG +A V QN  I  R+ +  Q N VTA G +       GIV+Q CRI     L   + +  TYLGRPWK++S TV+M +++ D+I P GW  W G     +  Y EY
Sbjct:  314 YREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEY 537          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.693e-42
Identity = 96/224 (42.86%), Postives = 129/224 (57.59%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNE--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V +PKK  N+               R+     G+TT  S TV V  +GF+A+ I FQNTAGP  HQAVA RV  D +  + C    YQDTLYV++ RQFY + +++GTVDFIFG +A V QN  I  R+ +P Q N VTA G +       GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+
Sbjct:  310 YKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEF 533          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.214e-40
Identity = 94/224 (41.96%), Postives = 128/224 (57.14%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNE--VDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQ-NTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V +PKK  N+               R+     G+TT  S TV V  +GF+A+ I FQNTAGP  +QAVA RV  D +  + C    YQDTLYV++ RQFY + +++GTVDFI G +A V QN  I  R+ +P Q N VTA G+        GIV+  CRI A  +L A + + ++YLGRPWK ++ T V+ ++I D+I P GW EW G     T  Y E+
Sbjct:  297 YKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEF 520          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.877e-33
Identity = 79/190 (41.58%), Postives = 109/190 (57.37%), Query Frame = 1
Query:  112 TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            T+NSA+ AV    F+A++ITF+NT      G    QAVALRV +D +AF+ C ML  QDTLY H  R +Y  C I G+VDFIFGNA ++++ C +HA     ++   VTAQGR    ++TG    KC++  T  L         YLGR W  +SR V   + + ++I P GWY W       T+FY +Y+
Sbjct:  166 TYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYK 343          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 3.913e-31
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 1
Query:   91 NEVDGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 621
            + V G+ TF   +V V G+ F+A +ITF+N+A     QAVA+RV +D  AFY C  L +QDTLY+H  +Q+   C I G+VDFIFGN+ A+ ++C IH +      +  +TAQ R    ++TG V  +C I           S   YLGRPW  + R V+  + +   I   GW+ W
Sbjct:   84 SRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVITGNGQ------SGYMYLGRPWGPFGRVVLAYTYMDACIRNVGWHNW 249          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 1.138e-30
Identity = 80/231 (34.63%), Postives = 115/231 (49.78%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDI--HARRPNPNQR---NMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V +PK K N+              +      + TF  ATV V G  F+A++I+F N A     G    QAVA+R+  D SAF  C     QDTL+    R ++  C I G++DFIFGNA +++Q+C I   A + +P  +     VTA GR   ++N+G     C IG T            +LGR W+ YSR V + + ++DVI P GW  ++      T+FY EY
Sbjct:  128 YYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTG---------HVWLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEY 349          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.259e-29
Identity = 81/233 (34.76%), Postives = 113/233 (48.50%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNE------VDGST--TFNSATVAVVGDGFLARDITFQNT----AGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            Y + V VPK K  + F            S ++       DG    T+ +A+V++  D F A  ITF+NT    AG    QAVALR+  D + FYR  +L  QDTL+  +   ++  C I G VDFIFGNA +++Q+CDIH+      +   + A  RD   ++TG     C I  T  +         YLGR W  YSRTV     I+D+I P GW +W        + + EY
Sbjct:  119 YREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHS---TAKRYGAIAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEY 339          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.644e-29
Identity = 67/189 (35.45%), Postives = 103/189 (54.50%), Query Frame = 1
Query:  100 DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            DG     S T+ +    F+ R +T QN  G +  +AVALRV +D +AFY C + +YQDTL   +   ++ +C I G  DFI G+A+++++ C +H+  PN      +TAQ R    + +G     C++          GS  T+LGRPW  YSR V   S  S+V+ P GW +W  +   +T++Y EY+
Sbjct:  119 DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPN---NGSITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYK 294          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 3.428e-27
Identity = 68/190 (35.79%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  112 TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            TF+S +VAV G+ F A +I+F+NTA     G    QAVAL+V  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++++C +H+     N    +TA G+D     TG V   C+I          GS   +LGR W+ Y+R +  ++ +S V++  GW +        T++Y E++
Sbjct:  116 TFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWRPYARVIFSKTYMSRVVSLDGWNDMGDPKTQRTVYYGEHR 295          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.190e-25
Identity = 71/229 (31.00%), Postives = 105/229 (45.85%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V V + K NL              +        T +S +  V    F A +I+F+N A     G +  QAVALR+  D +AFY C     QDTL     R F+  C I G++DFIFGN  +++Q+C I+  A+         +TAQGR   ++ +G     C+I          GS E  LGR W  Y+  V   + +S +I P GW  W  +    T+ + E++
Sbjct:  128 YREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHK 347          
The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME4_ARATH1.532e-4342.41Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_BRANA1.693e-4242.86Probable pectinesterase/pectinesterase inhibitor O... [more]
PME_BRACM1.214e-4041.96Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME53_ARATH1.877e-3341.58Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME31_ARATH3.913e-3138.98Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME8_ARATH1.138e-3034.63Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME62_ARATH1.259e-2934.76Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME11_ARATH1.644e-2935.45Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME14_ARATH3.428e-2735.79Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME15_ARATH4.190e-2531.00Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bp
TACATAAAAACTGTGGAGGTGCCGAAGAAGAAAATTAATCTTAAGTTTAT
TGGATATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGAGGTTG
ATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGGA
TTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAACA
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCAA
TTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAAA
TGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAATC
CAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCAG
AACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATTT
ACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAGC
GGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAAC
CCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTT
TTATGCAGAGTATCAAAA
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