CF832329

Overview
NameCF832329
Unique NameCF832329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3965 contig Csv1_Contig3965:731..1398. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.592e-24
Identity = 68/199 (34.17%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  100 DGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            D ++   S T A + D  + + ITF N+   PS  +        AVA  +G D SAFY       QDTL+    R ++  C I G VDFI G+  +++Q+C I     +  P     +TAQGR + N   G V   C          V G  + YLGR W+ YSR +   S+++DV++P GW+EW+       L YAE+
Sbjct:   95 DHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINC---------LVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEH 284          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.903e-24
Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 1
Query:  112 TFNSATVAVVGDGFLARDITFQNTAGP----SKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            T  SAT+ V  + F A  +T +NTA      S+ QA+A+R+ +D +AFY C    +QDTL       F+  C I GT DFIFG  A+++ N  +HA     +   ++TAQGR    +  G     C++  T   +        YLGR W  + + V   ++++ V+NP+GW E        T+FY EY+
Sbjct:  140 TVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHA---VGDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGI--------YLGRSWMSHPKVVYAFTEMTSVVNPSGWRENLNRGYDKTVFYGEYK 317          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.348e-23
Identity = 66/176 (37.50%), Postives = 90/176 (51.14%), Query Frame = 1
Query:  100 DGSTTFNSATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 624
            D + TF +  V     G    ++   NT G + HQA+AL   +D   +Y C+   YQDTL   +  Q Y +  I G VDFIFG +A A FQN DI      P   + +TA GR      +  VI K  + A       +G++  YLGRPW  Y+R V  Q+ +++VIN  GW EWS
Sbjct:  110 DLTATFRNKAV-----GSQVYNLNIANTCGQACHQALALSAWADQQGYYGCNFTGYQDTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVE-GPTSAS-ITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTY--YLGRPWSEYARVVFQQTSMTNVINSLGWTEWS 276          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.299e-23
Identity = 66/199 (33.17%), Postives = 97/199 (48.74%), Query Frame = 1
Query:  100 DGSTTFNSATVAVVGDGFLARDITFQNTAG-PSKHQ--------AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIH--ARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            D  +   S T + + D  + + ITF N+   PSK +        AVA  +G D SAFY       QDTL+    R ++  C I G VDFIFG   +++Q+C I     +  P     +TAQGR +P    G +   C          V G+   +LGRPW+ YSR +   S+++DV+ P GW  W+     + L +AE+
Sbjct:  100 DHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINC---------LVYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEH 289          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
Query:  121 SATVAVVGDGFLARDITFQNTAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFG-NAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWS 624
            +AT+    +G    ++   NT G + HQA+A+   +    +Y C    YQDTL   +  Q Y    I G VDFIFG +A A F  CDI      P+  + +TA GR   + ++  VI K  + A        G++  YLGRPW +Y+R    ++ ++DVIN  GW EWS
Sbjct:  111 TATLRNYAEGSAIYNLNIANTCGQACHQALAVSAYASEQGYYACQFTGYQDTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLE-GPSSAS-ITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTY--YLGRPWSQYARVCFQKTSMTDVINHLGWTEWS 275          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21
Identity = 70/230 (30.43%), Postives = 110/230 (47.83%), Query Frame = 1
Query:    1 YIKTVEVPKKKINLKFXXXXXXXXXXXXSRNEVDGSTTFNSATVAVVGDGFLARDITFQNTAG-----PSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHA---RRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            Y + V +P+ K  +              S++ VD      SAT  V  + F+A  I+ +N A       S++Q+VA  V +D  AFY C   +  +TL+ +  R +Y  C I G++DFIFG A ++F NC+I     +R  P     +TA  R+   + TG V  + +         V G  E YLGR    YSR +  ++ +S  + P GW  WS + +   L++ EY+
Sbjct:   83 YKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKP--YGSITAHHRESAEEKTGYVFIRGK---------VYGIDEVYLGRAKGPYSRVIFAKTYLSKTVVPDGWTNWSYHGSTQNLYHGEYK 298          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME52_ARATH (Putative pectinesterase 52 OS=Arabidopsis thaliana GN=PME52 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21
Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query:  205 AVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARR---PNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEYQ 666
            AVA+ V  D SAFY CD L  QDT++ +  R  + +C I G +DFIFG+  +V+++C I+A      +      +TAQGR   +  +G V  +          +V GS   YLGR +  +SR + +Q+D+S V++P GWY W       +  YAE +
Sbjct:  101 AVAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINATAGALASKVSFGYITAQGRSSDSDPSGFVFLRG---------SVSGSTSVYLGRAYGPFSRVIFIQTDLSSVVHPEGWYSWHYGGYEMSFTYAEVE 248          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.262e-21
Identity = 65/197 (32.99%), Postives = 89/197 (45.18%), Query Frame = 1
Query:  100 DGSTTFNSATVAVVGDGFLARDITFQN------TAGPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHAR---RPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            D   T  SAT        +   ITF+N      ++ P+K    A+ +G D  A        +QDTLY    R +Y  C+I+G +DFIFG A ++F+ C +  R    P       +TAQGRD P    G V + C          V GS +  LGR WK YSR +  +S  SD I P GW  W        + + E+
Sbjct:  107 DHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLG-DKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDC---------TVMGSGKALLGRAWKSYSRVIFYRSMFSDNILPIGWDAWKAKGQEGHITFVEF 293          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.262e-21
Identity = 57/175 (32.57%), Postives = 89/175 (50.86%), Query Frame = 1
Query:  112 TFNSATVAVVGDGFLARDITFQNTA-----GPSKHQAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEW 621
            T+ +A+V V  + F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R ++  C I G++DFIFGN  +++++C++H+     ++   + A GR  P + TG     CR+  T  L         Y+GR   +YSR V   +    ++   GW +W
Sbjct:  141 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPL---------YVGRAMGQYSRIVYAYTYFDALVAHGGWDDW 303          
BLAST of CF832329 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.395e-20
Identity = 59/188 (31.38%), Postives = 89/188 (47.34%), Query Frame = 1
Query:  112 TFNSATVAVVGDGFLARDITFQNTAGPSKH----QAVALRVGSDLSAFYRCDMLAYQDTLYVHSLRQFYTSCIIAGTVDFIFGNAAAVFQNCDIHARRPNPNQRNMVTAQGRDDPNQNTGIVIQKCRIGATSDLLAVKGSFETYLGRPWKRYSRTVVMQSDISDVINPAGWYEWSGNFALDTLFYAEY 663
            T  SAT+ V    FLA ++   NT+   K     QA+A+R+  D +AFY C    +QDTL       F+ +C I GT DFIFG  A+++    +HA     +   ++ A  R    +  G     C++      +        YLGR W  + + V   +++S V+NP+GW E        T+FY EY
Sbjct:  140 TVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHA---VGDGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGI--------YLGRAWMSHPKVVYSYTEMSSVVNPSGWQENRVRAHDKTVFYGEY 316          
The following BLAST results are available for this feature:
BLAST of CF832329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME55_ARATH1.592e-2434.17Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]
PME50_ARATH7.903e-2433.86Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME_ASPAC1.348e-2337.50Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE... [more]
PME29_ARATH2.299e-2333.17Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME_ASPTU1.947e-2235.50Pectinesterase OS=Aspergillus tubingensis GN=pme1 ... [more]
PME67_ARATH1.262e-2130.43Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME52_ARATH1.262e-2135.67Putative pectinesterase 52 OS=Arabidopsis thaliana... [more]
PME10_ARATH1.262e-2132.99Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME68_ARATH6.262e-2132.57Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PME49_ARATH1.395e-2031.38Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832329 ID=CF832329; Name=CF832329; organism=Citrus sinensis; type=EST; length=668bp
TACATAAAAACTGTGGAGGTGCCGAAGAAGAAAATTAATCTTAAGTTTAT
TGGATATGGGAGGACTACTACAATAATCACCGGTAGCAGGAATGAGGTTG
ATGGCAGCACTACATTCAACTCTGCAACTGTTGCTGTGGTAGGGGACGGA
TTCTTGGCCAGAGACATAACATTTCAAAACACGGCGGGTCCGTCAAAACA
TCAAGCCGTGGCACTGAGAGTAGGATCAGATTTATCAGCATTCTATAGGT
GTGACATGCTAGCATACCAAGACACTCTCTATGTACACTCACTTCGCCAA
TTTTATACCAGCTGCATTATAGCAGGCACAGTGGACTTCATTTTCGGAAA
TGCAGCAGCTGTGTTCCAAAACTGTGACATCCATGCTCGCCGCCCCAATC
CAAACCAAAGGAACATGGTCACGGCACAAGGCCGCGACGACCCGAATCAG
AACACAGGCATAGTGATACAAAAATGCAGGATTGGTGCAACATCAGATTT
ACTTGCTGTAAAGGGCAGCTTTGAGACATATTTAGGCAGGCCATGGAAGC
GGTACTCGAGGACTGTTGTGATGCAATCTGATATAAGTGATGTTATTAAC
CCAGCTGGGTGGTATGAATGGAGTGGGAATTTTGCATTGGACACATTGTT
TTATGCAGAGTATCAAAA
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