CF832332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W+++DV V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN G K A IV A ++I+ T NP+QV DA+IN PR Sbjct: 41 LFGKWSYEDVVVRDPGLRRYICLKPV----ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPR 141
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_DESMO (30S ribosomal protein S7P OS=Desulfurococcus mobilis GN=rps7p PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 47/107 (43.93%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W++ ++V D L YI ++ Y+PHT GR+ +RF K PIVERL N +M GRN G K +A IV A +IIH+ T NPIQV+ A+ N PR Sbjct: 14 IKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHTGGRHEHRRFGKTHVPIVERLINKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPR 116
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 6.422e-18 Identity = 48/107 (44.86%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W++ V+V D L YI ++ ++PHT GR+ +RF KA+ PIVERL N LM GRN G K +A IV A +II+ T NPIQV+ A+ N PR Sbjct: 21 IRLFGKWSWVGVEVRDPSLKRYINLKPV----WLPHTGGRHEKRRFGKAEVPIVERLMNKLMRPGRNGGKKHLAYNIVKTAFDIIYFETGENPIQVLVKAIENSAPR 123
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.095e-17 Identity = 49/105 (46.67%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W+F++V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN G K A IV A +I++ T NPIQV DA++N PR Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLKPV----VLPHTEGRYQNYRFGKARIPIVERLINLMMRPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPR 142
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.095e-17 Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 2 Query: 53 NVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 ++ +F +W K V++ D L YIG+ Y+PHT GR+ +RF KA+ PIVERL N++M GRN G K++A IV A +II L T NPIQV+ A+ N PR Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMPV----YLPHTGGRHEHRRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPR 112
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 1.869e-17 Identity = 46/107 (42.99%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W++ ++V D L YI ++ Y+PH+ GR+ KRF KA PIVERL N++M GRN G K +A IV + E+I+L T NP+QV+ A+ N PR Sbjct: 14 IKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHSGGRHEHKRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPR 116
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17 Identity = 49/108 (45.37%), Postives = 66/108 (61.11%), Query Frame = 2 Query: 53 NVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 NV +F +W K V+V D L YI + + Y+PHT GR+ +RF K++ PIVERL N+LM GRN G K++A IV +II + T NPIQV+ A+ N PR Sbjct: 11 NVKVFGKWDTK-VEVRDPSLKKYIDLMSI----YLPHTGGRHEHRRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPR 113
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.163e-17 Identity = 45/107 (42.06%), Postives = 66/107 (61.68%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +NLF ++++++V+VN++ L YI + VPH A + KA+ PI ER SLM HGRN+G K +A+ I A IIH +T NP+QV+ DA++N GPR Sbjct: 23 INLFEKYSYEEVKVNNVSLRPYINL---SRRGIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPR 126
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 7.101e-17 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2 Query: 53 NVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 ++ +F +W K V++ D L YI + Y+PHT GR+ +RF KA+ PIVERL N +M GRN G K +A IV A +II+L T NPIQV+ A+ N PR Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLMPV----YLPHTGGRHEHRRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPR 111
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.524e-16 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 182 IKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 IK F K QCPIVERL +M HG+N+G KL+A+ +V + EIIHLLT+ NPIQV+ DA+IN PR Sbjct: 2 IKPFRKIQCPIVERLVCCMMQHGKNSGKKLLAMRVVEESFEIIHLLTEKNPIQVLVDAIINASPR 66 The following BLAST results are available for this feature:
BLAST of CF832332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832332 ID=CF832332; Name=CF832332; organism=Citrus sinensis; type=EST; length=377bpback to top |