CF832332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16 Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 2 Query: 26 SQDPSPPRYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 +++ P LF W D++ +D YI V T + HT GR++ K+F K++ IVERL N LM N G K +A +IV A E++H TD NPIQV+ AV N PR Sbjct: 14 AEESEPETARAKLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPR 124
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 4.603e-16 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN G K A I+ A +II++ T NP+QV DAV+N PR Sbjct: 42 LFGKWNVNDVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPR 142
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.011e-16 Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 2 Query: 20 ALSQDPSPPRYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 A S+D N LF +W ++ D Y+ V T V HT GR++ K+F K++ IVERL N LM G N G K A+ IV A +I+H TD NPIQV+ AV N PR Sbjct: 16 AESEDTQEVAANAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPR 128
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.851e-16 Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2 Query: 38 SPPRYNVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLM------------MHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVIN 364 S P + LF RW++ D+++ + L + I ++ Y+PHT GR+ K+F K + PIVERL N LM ++ +N G KL A+ V +A EII L T NPIQV DA+ N Sbjct: 5 SNPETQIKLFGRWSYDDLRIENAALKNVISLKPV----YLPHTGGRHEHKKFGKLEIPIVERLVNRLMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGKNPIQVFLDAIEN 121
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 49/107 (45.79%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W + V V D L YI V VPHTAGR S K F K++ IVERL N LM + N G K + IV AL II T NP+QV+ DA+ N GPR Sbjct: 3 IKLFGKWDSETVAVKDPSLKSYISVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METM5 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps7p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.339e-15 Identity = 49/107 (45.79%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W + V V D L YI V VPHTAGR + K F KA+ IVERL N LM + N G K + IV AL II T NP+QV+ DA+ N GPR Sbjct: 3 IKLFGKWDSETVTVKDPSLKSYISVAPV----LVPHTAGRNTKKSFDKAKMNIVERLANKLMANQNNTGKKHETLAIVEEALAIIENRTKENPVQVLVDALENSGPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METM7 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps7p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 48/107 (44.86%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W + V V D L Y+ V VPHTAGR S K F K++ IVERL N LM + N G K + IV AL II T NP+QV+ DA+ N GPR Sbjct: 3 IKLFGKWDSETVTVKDPSLKSYVSVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQENTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METM6 (30S ribosomal protein S7P OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps7p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.749e-15 Identity = 48/107 (44.86%), Postives = 59/107 (55.14%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W + V V D L Y+ V VPHTAGR S K F K++ IVERL N LM + N G K + IV AL II T NP+QV+ DA+ N GPR Sbjct: 3 IKLFGKWDSETVTVKDPSLKSYVSVTPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.983e-15 Identity = 44/107 (41.12%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF +W ++ V D L YI + +VPHT+GR S + F KA+ IVERL N+LM +N G K + ++IV A EII T+ NP++V+ +A+ N GPR Sbjct: 3 IKLFNKWDTTEIVVKDPSLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPR 105
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.896e-15 Identity = 45/105 (42.86%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF RW +V + D + Y+ + ++ VPH+ GR + + F KA IVERL N LM N G K +A+ IV A EI+H T NPI+V+ DAV N GPR Sbjct: 12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPR 112 The following BLAST results are available for this feature:
BLAST of CF832332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832332 ID=CF832332; Name=CF832332; organism=Citrus sinensis; type=EST; length=377bpback to top |