CF832332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.637e-13 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + +F +W +V++ D+ + YI ++ V HT GR++ ++F K++ +VERL N +M +N G K +A IV A +IIH T NP+ V+ A+ N GPR Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPR 103
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.647e-13 Identity = 38/107 (35.51%), Postives = 62/107 (57.94%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + +F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N G K + V A +I+ T NPIQV+ DA+ N GPR Sbjct: 1 MKIFGKWDPTEVEVRDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPR 103
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.061e-12 Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 2 Query: 53 NVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 N LF W +++ D YI V T + HT GR++ K+F K++ +VERL N LM N G+K + IV A + IH T+ NP+QV+ V N PR Sbjct: 44 NAKLFGEWDVSEIEYEDPSTQRYITV------TPIAHTMGRHAAKQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPR 145
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_HALMO (30S ribosomal protein S7P OS=Halococcus morrhuae GN=rps7p PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.032e-12 Identity = 42/105 (40.00%), Postives = 57/105 (54.29%), Query Frame = 2 Query: 62 LFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 LF RW ++ +D YI V T V HT GR++ K+F K++ IVERL N LM N G K A IV +A ++I T+ +P+QV+ AV N PR Sbjct: 23 LFERWDVTGIEYDDPSTERYITV------TPVEHTMGRHAGKQFQKSEISIVERLINRLMQTDENTGKKQQATRIVRNAFDLIAERTEESPVQVLVSAVENAAPR 121
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.983e-12 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 53 NVNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMH---------GRNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGP 373 N+ LF +W D++V D L I +R +P+T GR ++KRF KA IVERL N MMH GR G K+ ++ V A EII+L T NP++V+ AV N P Sbjct: 6 NLLLFRKWDLSDIEVVDPGLKTAISLRKMT----LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAP 116
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 2.001e-11 Identity = 42/118 (35.59%), Postives = 57/118 (48.31%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHG-----------RNNGYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + LF RW ++DV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G G K A I+ EII T NP++V A+ N PR Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPR 116
BLAST of CF832332 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.931e-11 Identity = 45/123 (36.59%), Postives = 60/123 (48.78%), Query Frame = 2 Query: 56 VNLFIRWTFKDVQVNDI*LNDYIGVRAAKHATYVPHTAGRYSIKRFPKAQCPIVERLTNSLMMHGRNN----------------GYKLMAVTIVNHALEIIHLLTDHNPIQVIGDAVINRGPR 376 + +F RW+ +DV VND L YI A +PH+ GR++ K F KAQ IVERL N +M G ++ K+ A +V A II T NPIQV+ A+ N PR Sbjct: 15 LKVFGRWSVEDVTVNDPSLRPYI----ALEPRILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPR 133 The following BLAST results are available for this feature:
BLAST of CF832332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832332 ID=CF832332; Name=CF832332; organism=Citrus sinensis; type=EST; length=377bpback to top |