CF832333

Overview
NameCF832333
Unique NameCF832333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12148 contig Csv1_Contig12148:407..1188. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_HUMAN (Presequence protease, mitochondrial OS=Homo sapiens GN=PITRM1 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.558e-19
Identity = 73/240 (30.42%), Postives = 114/240 (47.50%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRD----IPKEPIRVPTEVGDI 709
            L+   P SP  K L+ESGLG D     G      +  FS+GL+ + E DI+TV  LI  T+ ++ ++GF+ D +EA ++ IE  ++  +T SF  GL L       W +D +P E LK    L   +  L E  +       +++Y  NN H +T+ M+PD +   +    E   L +   +++  D  ++     ELR +Q  P     L   P+L + D    IP   + V    GDI
Sbjct:  352 LLTSGPNSPFYKALIESGLGTDFSPDVGYNGYTREAYFSVGLQGIVEKDIETVRSLIDRTIDEVVEKGFEDDRIEALLHKIEIQMKHQST-SF--GLMLTSYIASCWNHDGDPVELLKLGNQLAKFRQCLQE--NPKFLQEKVKQYFKNNQHKLTLSMRPDDKYHEKQAQVEATKLKQKVEALSPGDRQQIYEKGLELRSQQSKPQDASCL---PALKVSDIEPTIPVTELDVVLTAGDI 583          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_EMENI (Mitochondrial presequence protease OS=Emericella nidulans GN=cym1 PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.722e-18
Identity = 73/265 (27.55%), Postives = 129/265 (48.68%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLGDAIVGG-GIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKS--------SMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVV 772
            L+L    SP+ K L+ESGLG +     G++     P FSIG+  VSE+    V+E I   L++    GF+ + V+  ++ +E +LR + T +F  GL ++ ++   W    +P + L + + + A K+R  + G       L++KY++N+ +C+T  M   P  +   E  +KE+  K K            ++ + ELA+A  +L   QE     + L  +PSL + DI ++    P     + G   +  +  TN + Y + V
Sbjct:  364 LLLDGYGSPMYKALIESGLGSSFTPNTGLDTSGKIPIFSIGVTGVSEEQAPRVKEEIQRVLQETLQRGFNDEKVQGFLHQLELALR-HKTANF--GLGVIQKTFTSWFNGSDPMKELAWNEVINAFKSRYEKGG---YLEALMQKYLIND-NCLTFTMVGTP--SFNKELDDKEMARKEKKFEQLTQQHGSVEKAVTELAKAELQLLEVQEKAQHAD-LSCLPSLRVEDISRQKEHKPVRESKVEGTDIVWREAPTNGLTYFQAV 618          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_ASPOR (Mitochondrial presequence protease OS=Aspergillus oryzae GN=cym1 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.487e-17
Identity = 70/264 (26.52%), Postives = 123/264 (46.59%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLGDAIVGG-GIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKS-SMTKEDLAELARATEELR------LKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVV 772
            L+L    SP+ + L+ESGLG +     G++     P  S+GL  VSE+D   V+E I    +     GF  + V+  ++ +E +LR + T +F  G+ +M +++  W   ++P + L +   +   K R  + G       L++KY++N+  C+T  M   P      E  ++E++ K K  S   E    + +A   LR      LK +       L  +PSL + DI +E  R P     ++ V  +  +  TN + Y + +
Sbjct:  340 LLLDGYGSPMYRALIESGLGSSFTPNTGLDTSGRVPVLSVGLTGVSEEDAPKVKEAIQKVYQDSLSAGFSDEKVQGFLHQLELALR-HKTANF--GIGVMEKTISSWFNGVDPMKELAWNDVINEFKRRYQQGG---YLESLMQKYLMND-RCLTFTMVGTP--TFHQELDQQEMVRKEKKLSQLVEQHGSMEKAISSLREQELQLLKTQEEAQHADLGCLPSLRVEDISREKERKPVRESKVDDVDVVWREAPTNGLTYFQAL 594          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_ASPFU (Mitochondrial presequence protease OS=Aspergillus fumigatus GN=cym1 PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.236e-17
Identity = 66/262 (25.19%), Postives = 128/262 (48.85%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLGDAIVGG-GIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDP----EKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEA-LRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVV 772
            L+L    SP+ + L+E GLG +     G++     P FS+GL  VSE D   V+  I    ++    GF+ + V+  ++ +E +LR + T +F  G+ +M +++  W    NP + L + + +   K +  + G       L++KY++N+ +C+T  M   P    +   ++   +++ L+++       + A  A A EEL+L +   +   A L  +PSL + DI +E  R P     ++ +  +  +  TN + Y + +
Sbjct:  373 LLLDGYGSPMYRALIEGGLGSSFTPNTGLDSSGRVPIFSVGLTGVSEADAPKVKSTIKRVFEESLSSGFNDEKVQGFLHQLELALR-HKTANF--GIGVMEKTLSSWFNGSNPMKELSWNEVIDEFKKKYEQGG---YLESLMQKYLMND-NCLTFTMVGTPSYNKDLDDQEMVRKEKKLSELVERHGSVEQAVSALAEEELQLLKIQEEAQNADLSCLPSLRVEDISREKERKPVRESKMDDIDVVWREAPTNGLTYFQAL 627          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: Y228_BORBU (Uncharacterized protein BB_0228 OS=Borrelia burgdorferi GN=BB_0228 PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.234e-16
Identity = 59/249 (23.69%), Postives = 117/249 (46.99%), Query Frame = 2
Query:   44 LLESGLGDAIVG-GGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQP--DPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFDM 781
            +L+SG+G+ I    GI  +L +  FS GL+NV E+  +  + L+   LK L       + ++  +   EF+L+E    +FP  ++LM++S   W+  ++P + L+    +  +  +L  E     F  LIEKY++ N H   +   P  D EK   +E  +K +  +++     E+  +  +   + +  Q   D    +  +P L + D+PK+ I    ++ +I  +        +N++    + F +
Sbjct:  313 ILKSGIGEDIAHISGINTDLKESIFSFGLQNVVENKEKEFKNLVFSELKNLVKNKIPKELIKGILFGYEFALKEEKGQNFP--IALMIKSFKGWLNGLHPIKTLQTSYYINEITNKL--EKGIYYFENLIEKYLIFNNHYTLISFIPSHDTEKEMEEEIEKKLMAREIEIKQNPEEFLQFKKDYNQFKKYQNKKDSKADIAKLPLLKIEDLPKQ-IEKSLDLNEIKELNLHSFKFKSNNIFNVNLFFKL 556          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_XENLA (Presequence protease, mitochondrial OS=Xenopus laevis GN=pitrm1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15
Identity = 59/228 (25.88%), Postives = 117/228 (51.32%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDI-PKEPI 682
            LM+  P SP  K L+E+ LG D     G  +   +  FSIGL+ ++++D + V+ +I  T+ ++A++G + + +EA ++ +E  ++  +T SF  GL+L       W ++ +P + LK    +   +  L E  +       +++Y   N H + + M PD +   ++E  E+E L +   ++++E+  ++     EL   Q     P+    +P+L + DI P+ P+
Sbjct:  346 LMVDGPNSPFYKALIEANLGTDFSPDTGFNNYTRETYFSIGLQGINKEDSEKVKHIINRTINEIAEQGIEPERIEALLHKLEIQMKHQST-SF--GLTLASYIASCWNHEGDPVDLLKIGDKISRFRQCLKE--NPKFLQDKVKQYFQVNQHRMMLSMSPDEQHYDKEEQLEEEKLTQKVKALSEEERKQIYEKGLELISLQ---SKPQDFSCLPALKVSDIEPQIPL 565          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_XENTR (Presequence protease, mitochondrial OS=Xenopus tropicalis GN=pitrm1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15
Identity = 59/229 (25.76%), Postives = 120/229 (52.40%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAEL-ARATEELRLKQETPDPPEALRSVPSLSLRDI-PKEPI 682
            LM+  P SP  K L+E+ LG D     G  +   +  FSIGL+ ++++D + V+ +I  T+ ++A+ G +++ +EA ++ +E  ++  +T SF  GL+L       W ++ +P + LK    +   +  L E  +       +++Y   + H +T+ M PD +   ++   E E L +   ++++E+  ++  +  E +RL+ +    P+    +P+L + DI PK P+
Sbjct:  346 LMVDGPNSPFYKALIEANLGTDFSPDTGFNNYTRETYFSIGLQGINKEDSEKVKAIINKTINEVAEHGIEAERIEALLHKLEIQMKHQST-SF--GLTLASYVASCWNHEGDPVDLLKIGDKISRFRECLKE--NPKFLQDKVKQYFQVSQHRMTLSMSPDEQHYDKEAQLEAEKLTQKVKALSEEERKQIYEKGLELIRLQSK----PQDASCLPALKVSDIEPKIPL 565          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_DEBHA (Mitochondrial presequence protease OS=Debaryomyces hansenii GN=CYM1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.971e-15
Identity = 71/261 (27.20%), Postives = 122/261 (46.74%), Query Frame = 2
Query:   26 SPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVE--------ELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFDM 781
            SP  + L+E   G D  V  G++       F+IGL N+S +  + +E        E I+  L+K  + GF+ D +EA ++ IE + + N+   F  G+ L+   +  W+  +NP + L+ +  L   K      G K     L E  + ++       M+PD        + E E L K   ++T+ED   + + + EL  KQ+  +   AL   P+L+++DIP+E    P +  DIN  K  +  + TN ++Y     D+
Sbjct:  363 SPFYQELIEKEYGEDFAVNYGLDATTALLSFTIGLNNLSLEKAKNLEDKVRGIFVEKIIPELQKGKESGFN-DRIEAILHQIELNFK-NHKPEF--GIGLLSSVVSTWVNGLNPVKSLQIDHILNRFKEDYKLNGLKMFQDLLDESVLKDDTPKFKFTMEPDESFGKNLTSQETERLNKKIEALTEEDKEIIYKRSIELAEKQKKEEDVSAL---PTLTVKDIPREGDFYPLDFADINSKKLQKRIVDTNGLIYMNATKDI 616          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_YEAST (Mitochondrial presequence protease OS=Saccharomyces cerevisiae GN=CYM1 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 4.390e-14
Identity = 65/267 (24.34%), Postives = 126/267 (47.19%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDI--QTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTE--------VGDINGVKSLQHDLFTNDVLYTEV 769
            +L++   +S + + L+ESG+G +  V  G+E        ++G++ VS+ +I   TV  +  + L+   +  FD   ++A +  +E S ++        GL L+   +  W   ++PFE L +E  L   +  L  +G   +F  LI KYI++ P C T  +Q   E +   ++ + E   +++  +T  D  +     +   L QE  +  E L  +P+L ++DIP+   +   E        + D NG+  ++     ND++  E+
Sbjct:  326 NLLMDGHSSVMYQKLIESGIGLEFSVNSGVEPTTAVNLLTVGIQGVSDIEIFKDTVNNIFQNLLE--TEHPFDRKRIDAIIEQLELSKKDQKADF---GLQLLYSILPGWTNKIDPFESLLFEDVLQRFRGDLETKGD-TLFQDLIRKYIVHKP-CFTFSIQGSEEFS---KSLDDEEQTRLREKITALDEQDKKNIFKRGILLQEKQNEKEDLSCLPTLQIKDIPRAGDKYSIEQKNNTMSRITDTNGITYVRGKRLLNDIIPFEL 582          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: PREP_DROME (Presequence protease, mitochondrial OS=Drosophila melanogaster GN=CG3107 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 9.780e-14
Identity = 60/263 (22.81%), Postives = 119/263 (45.25%), Query Frame = 2
Query:    5 LMLGTPASPLRKILLESGL-GDAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEIL---AKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKEPIRVPTEVGDINGVKSLQHDLFTNDVLYTEVVFDM 781
            +++  P SP  K L+E    G      G   +     F +GL+++  +D +   E+   T+    ++GFDS  VE+ ++ +E SL+  N      G +L+  S   W +D +    L+    +  L+  +++  +K  F   IEKY  NN H +T+ M PD     + + AE E++    K+   +  E + E     +  +  +   D       +P L++ D+   P      + ++  V++    + TN++ Y + +F++
Sbjct:  377 VLIRGPNSPFYKNLIEPNFSGGYNQTTGYSSDTKDTTFVVGLQDLRVEDFKKCIEIFDKTIINSMNDGFDSQHVESVLHNLELSLKHQNPNF---GNTLLFNSTALWNHDGDVVSNLRVSDMISGLRESISQ--NKKYFQEKIEKYFANNNHRLTLTMSPDEAYEDKFKQAELELVEQKVKLLDEVKIEKIYERGLILDSYQKAESNTD------LLPCLTMNDVRDPPKWPKLFIQNVQNVRTQICKVPTNEITYFKCMFNI 628          
The following BLAST results are available for this feature:
BLAST of CF832333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PREP_HUMAN1.558e-1930.42Presequence protease, mitochondrial OS=Homo sapien... [more]
CYM1_EMENI1.722e-1827.55Mitochondrial presequence protease OS=Emericella n... [more]
CYM1_ASPOR2.487e-1726.52Mitochondrial presequence protease OS=Aspergillus ... [more]
CYM1_ASPFU7.236e-1725.19Mitochondrial presequence protease OS=Aspergillus ... [more]
Y228_BORBU1.234e-1623.69Uncharacterized protein BB_0228 OS=Borrelia burgdo... [more]
PREP_XENLA1.045e-1525.88Presequence protease, mitochondrial OS=Xenopus lae... [more]
PREP_XENTR1.365e-1525.76Presequence protease, mitochondrial OS=Xenopus tro... [more]
CYM1_DEBHA3.971e-1527.20Mitochondrial presequence protease OS=Debaryomyces... [more]
CYM1_YEAST4.390e-1424.34Mitochondrial presequence protease OS=Saccharomyce... [more]
PREP_DROME9.780e-1422.81Presequence protease, mitochondrial OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832333 ID=CF832333; Name=CF832333; organism=Citrus sinensis; type=EST; length=781bp
TCATCTTATGCTGGGAACTCCTGCTTCTCCCTTGAGGAAAATTTTACTAG
AAAGTGGTCTTGGAGATGCCATTGTTGGTGGTGGGATTGAAGATGAACTC
CTTCAGCCTCAATTTAGTATCGGATTGAAGAATGTTTCTGAAGATGACAT
TCAAACGGTAGAAGAATTAATCATGGATACACTAAAAAAACTAGCAGACG
AAGGTTTTGATAGTGATGCTGTAGAGGCATCCATGAATACAATAGAGTTT
TCTCTCAGGGAAAATAATACTGGGTCATTTCCTCGTGGCTTATCACTGAT
GCTTCGATCCATGGGTAAATGGATATATGATATGAATCCATTTGAGCCAT
TGAAGTATGAGAAACCCTTGATGGCCCTTAAAGCACGATTAGCTGAGGAG
GGCTCCAAAGCTGTTTTCTCTCCTCTAATTGAGAAATATATTTTAAACAA
TCCCCACTGTGTTACGGTAGAAATGCAGCCTGATCCAGAGAAAGCCTCTC
GTGATGAAGCAGCTGAAAAAGAAATTTTGGCTAAAGTCAAATCAAGCATG
ACAAAGGAAGATTTGGCTGAGCTAGCACGTGCTACTGAGGAGCTAAGGTT
GAAGCAAGAAACTCCTGACCCTCCAGAAGCTTTGCGAAGTGTTCCAAGTC
TATCTTTGCGTGACATTCCCAAAGAACCTATACGTGTTCCCACAGAGGTT
GGAGATATCAATGGAGTAAAAAGTCTGCAGCATGACCTTTTCACAAATGA
CGTCCTTTATACAGAAGTTGTCTTTGATATG
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