CF832333

Overview
NameCF832333
Unique NameCF832333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12148 contig Csv1_Contig12148:407..1188. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_KLULA (Mitochondrial presequence protease OS=Kluyveromyces lactis GN=CYM1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.009e-12
Identity = 59/248 (23.79%), Postives = 117/248 (47.18%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPK--------EPIRVPTEVGDINGV 718
            +L+L   +SP  + L+ESGL  D  V  G+E +      +IG++    D++ ++ E+I    +++    F+   ++A +  +E S ++        GL L+   +  W+   +PF+ L +++ L   +   A +G   +F  LI++++++ P      M+     + + +A E+E L +    + +ED   +    ++L   QE  D  E L  +PSL +  IP+        E   V   + D NG+
Sbjct:  326 NLLLDGHSSPFYQKLIESGLAYDFSVNTGVESQTAANFITIGVQGC--DEVDSIYEVINKVWEEVLQNPFEESRIQAIIQQLELSKKDQRADF---GLQLLYSVLPGWVNKTDPFDSLLFDETLERFQEDWATKGDN-LFKDLIKEFVISKP-VFKFTMKGSETFSQKLDAEEQERLERKLKLLDEEDKKVIFERGKQL---QELQDLKEDLSCLPSLQISAIPRVSKTYPLLEKDNVLNRITDTNGI 563          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_ASHGO (Mitochondrial presequence protease OS=Ashbya gossypii GN=CYM1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.478e-11
Identity = 52/213 (24.41%), Postives = 103/213 (48.36%), Query Frame = 2
Query:   35 RKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIP 670
            +K++ E+GL  +  V  G+E +      ++G++  +  ++  V ++IM+T   L  + F+   VEA ++ +E S ++  +     GL L+   +  W+ + +PF+ L     L   +A    EG   +F  L+ KY++  P      +        +D+  + ++ AKV SS+T+ D   + +    L   QE  +  + L  +P+L+  DIP
Sbjct:  338 KKLVEETGLAYELSVNTGVESQTAANFLTVGVQGCT--NVGKVHKVIMETFTALLAQPFEKHRVEAILHQLELSKKDQKSDF---GLQLLYGILPGWVNNTDPFDLLSLNSALQRFRADWDREGD-GLFQRLLNKYVIGKPSFTFTMVGSSDFNQVKDQNEQSKLKAKV-SSLTESDKEVIYKRGLHL---QELQNSEQDLSKLPTLTTADIP 540          
BLAST of CF832333 vs. ExPASy Swiss-Prot
Match: CYM1_CANGA (Mitochondrial presequence protease OS=Candida glabrata GN=CYM1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.933e-11
Identity = 54/226 (23.89%), Postives = 110/226 (48.67%), Query Frame = 2
Query:    2 HLMLGTPASPLRKILLESGLG-DAIVGGGIEDELLQPQFSIGLKNVSEDDIQTVEELIMDTLKKLADEGFDSDAVEASMNTIEFSLRENNTGSFPRGLSLMLRSMGKWIYDMNPFEPLKYEKPLMALKARLAEEGSKAVFSPLIEKYILNNPHCVTVEMQPDPEKASRDEAAEKEILAKVKSSMTKEDLAELARATEELRLKQETPDPPEALRSVPSLSLRDIPKE 676
            +L+L    S + K L+ESGLG D  V  G+E        ++G++     +++  +  + D  K+  +   DS+ V+A ++ +E S ++        GL ++   +  W   ++P E L++++ +  LK+   E G+K +F  +++KYI++ P+     M+   E +S+  A E     K+   + + D  +     E   L +   +  E L  +P+L + DI ++
Sbjct:  326 NLLLDGHDSIMYKGLIESGLGHDFSVNTGVESMTAANFLTVGIQG--SQNVEEFKSKVFDLFKEFIENDVDSNKVDAIIHQLELSKKDQKADF---GLQILYSILPGWTNGIDPIEGLEFDELIGRLKSDFKENGTK-IFKNILDKYIIDQPY-FHFTMKGSEEFSSKLAAEES---TKLDKKLKELDETDRKAIFERGLLLEAAQNHKEDLSCLPTLGVADISRK 541          
The following BLAST results are available for this feature:
BLAST of CF832333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CYM1_KLULA7.009e-1223.79Mitochondrial presequence protease OS=Kluyveromyce... [more]
CYM1_ASHGO3.478e-1124.41Mitochondrial presequence protease OS=Ashbya gossy... [more]
CYM1_CANGA5.933e-1123.89Mitochondrial presequence protease OS=Candida glab... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01L05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01L05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832333 ID=CF832333; Name=CF832333; organism=Citrus sinensis; type=EST; length=781bp
TCATCTTATGCTGGGAACTCCTGCTTCTCCCTTGAGGAAAATTTTACTAG
AAAGTGGTCTTGGAGATGCCATTGTTGGTGGTGGGATTGAAGATGAACTC
CTTCAGCCTCAATTTAGTATCGGATTGAAGAATGTTTCTGAAGATGACAT
TCAAACGGTAGAAGAATTAATCATGGATACACTAAAAAAACTAGCAGACG
AAGGTTTTGATAGTGATGCTGTAGAGGCATCCATGAATACAATAGAGTTT
TCTCTCAGGGAAAATAATACTGGGTCATTTCCTCGTGGCTTATCACTGAT
GCTTCGATCCATGGGTAAATGGATATATGATATGAATCCATTTGAGCCAT
TGAAGTATGAGAAACCCTTGATGGCCCTTAAAGCACGATTAGCTGAGGAG
GGCTCCAAAGCTGTTTTCTCTCCTCTAATTGAGAAATATATTTTAAACAA
TCCCCACTGTGTTACGGTAGAAATGCAGCCTGATCCAGAGAAAGCCTCTC
GTGATGAAGCAGCTGAAAAAGAAATTTTGGCTAAAGTCAAATCAAGCATG
ACAAAGGAAGATTTGGCTGAGCTAGCACGTGCTACTGAGGAGCTAAGGTT
GAAGCAAGAAACTCCTGACCCTCCAGAAGCTTTGCGAAGTGTTCCAAGTC
TATCTTTGCGTGACATTCCCAAAGAACCTATACGTGTTCCCACAGAGGTT
GGAGATATCAATGGAGTAAAAAGTCTGCAGCATGACCTTTTCACAAATGA
CGTCCTTTATACAGAAGTTGTCTTTGATATG
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