CF832337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP228_ARATH (Pentatricopeptide repeat-containing protein At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 34/97 (35.05%), Postives = 56/97 (57.73%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLE 295 ALL++CR+++ +G+ A + E + G YVLL N+Y SG +VR LMR++G+ +P SW+ + + H+F D HP + I ++LE Sbjct: 633 ALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLE 729
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 38/101 (37.62%), Postives = 61/101 (60.40%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHV----GYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVL 292 GALLN CR H+ +ELGELA ++ + + +V V L N+Y + + E KVR ++ ++G+ PG S +EV G V F+SGD HP + +I++++ Sbjct: 393 GALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLI 493
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP167_ARATH (Pentatricopeptide repeat-containing protein At2g21090 OS=Arabidopsis thaliana GN=PCMP-E48 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.963e-11 Identity = 32/91 (35.16%), Postives = 53/91 (58.24%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKE 277 A+L CRIH ELG+ AA + + D Y+LL ++YA GKW+ V K+R +M+++ + + SW+E++ +V AF D H ++ Sbjct: 486 AILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARK 576
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP242_ARATH (Putative pentatricopeptide repeat-containing protein At3g18840 OS=Arabidopsis thaliana GN=PCMP-E92 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.870e-11 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVL 292 GA LNAC ++ EL + + + + Y+ + N YA+SG+WDE+ ++R MR K L I GCSW + + H F S D H + + I ++L Sbjct: 567 GAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP261_ARATH (Pentatricopeptide repeat-containing protein At3g29230 OS=Arabidopsis thaliana GN=PCMP-E27 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 35/102 (34.31%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYE 307 GALL ACR+H +++ + ++ + D G Y LL N+YAA+ W+ VA +R M+ G+ G S VE++ +H F D HP+ +I +L E Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSLIE 589
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP255_ARATH (Putative pentatricopeptide repeat-containing protein At3g25970 OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 31/102 (30.39%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 11 LNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMK 316 L CR +E+ A H+ E + YV L ++Y+ KW+E A V+++M+E+G+ PG SW+E++ +V AF + D +P ++I +++ ++M+ Sbjct: 585 LGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP148_ARATH (Pentatricopeptide repeat-containing protein At2g04860 OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.601e-11 Identity = 31/61 (50.82%), Postives = 42/61 (68.85%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKG 184 GALL+AC IHR LE+GE A +F D ++ G YVL+ NLYA WD+V +VR +M++ G Sbjct: 572 GALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 632
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP201_ARATH (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVL 292 + L+AC ++ +E E E + ++ G YVLL NLYAA +WD+ V+ +MR+ + GCS +E+ V F+SGD HP + I+ VL Sbjct: 446 SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVL 541 The following BLAST results are available for this feature:
BLAST of CF832337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832337 ID=CF832337; Name=CF832337; organism=Citrus sinensis; type=EST; length=714bpback to top |