CF832337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.655e-44 Identity = 88/203 (43.35%), Postives = 119/203 (58.62%), Query Frame = 2 Query: 11 LNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMDK-----SEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 L ACR+H ELG+LAA I E D Y+ L N+YA +GKW+E ++RR M+E+ L + GCSW+EV ++H F GD HP +I L+ ++K G+ + + K EA K + HSE +AVAFGLI+T+ P+ V KNL C CHN +K+IS + R+I +RD FHHFKDG CSC D YW Sbjct: 650 LGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCND--YW 850
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 3.468e-44 Identity = 90/202 (44.55%), Postives = 124/202 (61.39%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVE-VKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 A L+ CRIH +ELGE AA I E + H G Y LL NLYA +G+W +V ++R LMR KG+ PGCSWVE +KG F GD HP KEI VL +++K +G+ + + D + K ++ HSE LA+A+G++ T G I +TKNL C CH ++S+I+ DI +RD+ FHHFK+G+CSC +GYW Sbjct: 652 AFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSC--KGYW 850
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.726e-44 Identity = 92/203 (45.32%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGS-EYVSMDKSEASKAE-IFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL ACRIH+ +ELGE + D H G YV N++A KWD+ A+ RRLM+E+G+ PGCS + ++G H FL+GD HP+I++I S K++ G+ E + +D + + E I HSE LA+ +GLI T PG I + KNL C CH K ISKI +RDI +RD FHHF+DG CSCGD YW Sbjct: 420 GALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGD--YW 620
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.726e-44 Identity = 94/204 (46.08%), Postives = 123/204 (60.29%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSE---YVSMDKSEASKAEIFCG-HSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 ALL ACR H+ + L E AA + YV+L N+YA + KW+E+A VR+ MR K + PGCSW+EVK + H F++ D HP I+E+N LE +KMK VG+ + V D++ E+ G HSE LAVAFGL++T G + V KNL C CHN +KF+S + R+I VRD FH FKDG CSCGD YW Sbjct: 520 ALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGD--YW 721
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.009e-43 Identity = 89/201 (44.28%), Postives = 123/201 (61.19%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 +LL+A R+++ LELG LA+ + E +T + G YVLL N+YA S WD V+ VR+ M+ KG+ PGCS +EV GEVH F GD HP+ +I++V + +++ G+ A + V D E K + C HSE A+AFG+++ +PI + KNL C CH ISKI R+I VRD FHHFKDG CSC G+W Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSC--NGFW 612
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.009e-43 Identity = 90/202 (44.55%), Postives = 122/202 (60.40%), Query Frame = 2 Query: 8 LLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAG---SEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 LL ACR+H +ELGE H+ E G YVLL N Y+ GKW++V ++R LM+EK + PGCS +E++G VH F+ D HP+ +EI +L +++K G+ SE +++ SE K HSE LA+AFG++ T PG I VTKNL TC CHN KF+S + R + VRD FHHFK G+CSC D +W Sbjct: 393 LLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLE-SEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCND--FW 591
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370 OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43 Identity = 85/198 (42.93%), Postives = 123/198 (62.12%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKM-KAVGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGD 592 ALL ACR H E+GE+AA + E + ++ G VL+ N++A G+W++V KVR M+ G+ PGCSW+E+ G+VH F + D HP+ KEI L K+ + VG+ A +++V + E K ++ GHSE +A+A+GL+ T + +TKNL C CH K +SK+ RRDI +RD FHHF+ G CSCGD Sbjct: 761 ALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGD 958
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43 Identity = 89/203 (43.84%), Postives = 131/203 (64.53%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKA-VGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL ACR+++ +LG AA +FE + R YV+L N+Y+ASG W + +++R LM++KGL GCS++E ++H F+ GD HP+ ++I L+ +KMK+ +G+ + +E+V D E K E+ HSE +A+AFGL+ +P PI + KNL C CH T K IS I +R I +RD++ FHHF DG+CSC D YW Sbjct: 408 GALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSD--YW 608
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43 Identity = 92/200 (46.00%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 8 LLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 LL+ACR LE+G+ AA + E D H Y LL ++YA+ GKWD VA++RR MREK + +PG SW++ KG++H+F + D P + +I + LE K+ G+ + +V D EA K ++ HSE LA+AFGLI G PI V KNL C CHN K IS + R+I VRD FH FKDGTCSCGD +W Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGD--FW 743
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP271_ARATH (Putative pentatricopeptide repeat-containing protein At3g49140 OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.834e-43 Identity = 94/207 (45.41%), Postives = 119/207 (57.49%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTA-----PGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL ACR+H ++G LAA +F+ GYYVLL N+YA +G+W+EV +R +M+ KGL +PG S VEV +H FL GD HPQ EI L+ +KMK +G+ SE D E K HSE LA+ F L+NT I +TKNL C CH K IS+I R+I +RDT FH F+ G CSCGD YW Sbjct: 482 GALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGD--YW 686 The following BLAST results are available for this feature:
BLAST of CF832337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832337 ID=CF832337; Name=CF832337; organism=Citrus sinensis; type=EST; length=714bpback to top |