CF832337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein At4g37380, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.540e-43 Identity = 86/201 (42.79%), Postives = 126/201 (62.69%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 ++L +C++H LG+ A ++ + ++ G YVLL N+YA+ G ++ VAKVR LM+EKG+ +PG S +E++ +VH F +GD H + KEI ++L E++K+ G+ + V D E K + HSE LA+A+GLI+T PG P+ + KNL C CH K ISKI R I +RD FHHF DG+CSCGD +W Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGD--FW 632
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.540e-43 Identity = 88/203 (43.35%), Postives = 125/203 (61.58%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAG--SEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL AC+IH L L E+A + E + R+ G +VLL N+YA GKW+ V+++R+ MR GL +PGCS +E+ G +H FLSGDN HP +++ L EK+K+ G+ S+ + + + E K + HSE LA+ +GLI+T I V KNL C CH+ K IS++ R+I VRD FHHF++G CSC D +W Sbjct: 538 GALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCND--FW 738
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP210_ARATH (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.542e-43 Identity = 90/198 (45.45%), Postives = 115/198 (58.08%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGS--EYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGD 592 ++L ACR +E E + I E + GY +L N YAA KWD+V+ +R+ +++K +T +PG SW+EV VH F SGD+ PQ + I LE Y M G+ E + E K + CGHSE LA+AFGL+NT PG P+ V KNL C CH K ISKIV R+I VRD FH FKDGTCSC D Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKD 880
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP229_ARATH (Pentatricopeptide repeat-containing protein At3g14330 OS=Arabidopsis thaliana GN=PCMP-H57 PE=2 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.116e-42 Identity = 83/203 (40.89%), Postives = 127/203 (62.56%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFH-PQIKEINSVLEGFYEKMKAVGFAGSEYVSM-DKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 G+LLN+CR+H + +GE+AA +F + + G YV++ N+YA + WD V K+R +M+++G+ + GCSWV+VK ++ F++G + E V E ++ G++ + V + D E +KA CGHSE LA + LI+T G+PI +TKNL C CH+ +K +S++ RR I +RDT+ FHHF DG CSC D YW Sbjct: 510 GSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKD--YW 710
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.116e-42 Identity = 89/202 (44.06%), Postives = 121/202 (59.90%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 GALL+ CR+ + +L E + + + G YV L N+Y+ G+WDE A+VR +M +KG+ PG SW+E++G+VH FL+ D HP +I + LE +M+ +GF +E+V D E K + HSE LAVA GLI+T G I V KNL C CH +K ISKI RR+I VRD FH F +G+CSC D YW Sbjct: 486 GALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCND--YW 685
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP206_ARATH (Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.485e-42 Identity = 92/202 (45.54%), Postives = 120/202 (59.41%), Query Frame = 2 Query: 5 ALLNACRIHRWLELGELAAGHIFETDT-RHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFA-GSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 ++LNACRIH+ L E AA +F + R YV + N+YAA+G+W++V V++ MRE+G+ P SWVEV ++H F S D HP EI + +++ G+ + V D E K E HSE LAVAF LI+T G PI V KNL C CH +K ISKIV+R+I VRDT FHHF +G CSCGD YW Sbjct: 626 SVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGD--YW 825
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PPR25_ARATH (Pentatricopeptide repeat-containing protein At1g09410 OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.537e-42 Identity = 84/203 (41.38%), Postives = 120/203 (59.11%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGD-NFHPQIKEINSVLEGFYEKMKAVGF-AGSEYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 G+LL ACR H L++ E A + E + + G Y+LL N+YA+ G+W +VA++R+LM+ + + PGCSW EV+ +VHAF G N HP+ + I +L+ ++ G+ Y D E K HSE LAVA+ L+ + G+PI V KNL C CH +K ISK+ R+I +RD FHHF++G CSC D YW Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKD--YW 705
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP227_ARATH (Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 7.231e-42 Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 2 Query: 2 GALLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGS-EYVSMDKSEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 G+LL ACR+H +++GE + E + + G YV+L NLYA++G+W +V VR +M +K +T +PG SW++ + +H F + D HP+ +E+ + ++ KMK G+ V D E K ++ GHSE LA+ FGLI T G+PI V KNL C CHN K SK+ R++ +RD FH DG CSCGD YW Sbjct: 429 GSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGD--YW 628
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.233e-41 Identity = 84/200 (42.00%), Postives = 118/200 (59.00%), Query Frame = 2 Query: 8 LLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMDK-SEASKAEIFCGHSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 LL+AC +H+ +E+GE AA H+ E + YVLL NLYA S KWD R+ M+EKG+ +PG SW+EVK +H+F GD HP EI+ + ++ +G+ + +++ K I HSE LA++FGL++ +PI V KNL C CH +KF+SK+ R+I VRD FHHF+ G CSC D YW Sbjct: 867 LLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKD--YW 1064
BLAST of CF832337 vs. ExPASy Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.104e-41 Identity = 88/200 (44.00%), Postives = 115/200 (57.50%), Query Frame = 2 Query: 8 LLNACRIHRWLELGELAAGHIFETDTRHVGYYVLLCNLYAASGKWDEVAKVRRLMREKGLTIDPGCSWVEVKGEVHAFLSGDNFHPQIKEINSVLEGFYEKMKAVGFAGSEYVSMDKSEASKAEIFCG-HSEMLAVAFGLINTAPGMPIWVTKNLYTCPSCHNTVKFISKIVRRDIFVRDTEHFHHFKDGTCSCGDEGYW 604 LL ACRIH+ L + +FE D +VGY+VLL N+++A + + A VR+ +++ L PG + +E+ H F SGD HPQ+KEI LE KM+ G+ +++ E + E+ HSE LA+AFGLI T PG I + KNL C CH K ISKI R I VRD FHHFKDG CSCGD YW Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGD--YW 792 The following BLAST results are available for this feature:
BLAST of CF832337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832337 ID=CF832337; Name=CF832337; organism=Citrus sinensis; type=EST; length=714bpback to top |