CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_ARCFU (50S ribosomal protein L10e OS=Archaeoglobus fulgidus GN=rpl10e PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 64/143 (44.76%), Postives = 86/143 (60.14%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 P ++R++D+G K AD FP + LV+ E ALEAAR+ NKY++ AG + L++R+ P H+LR +KM AGADR+ GMR AFGKP G ARV G ++SV K + A EALRRA K P KI+V + Sbjct: 26 PGTRVRMFDMG--NKSAD-FPVMLTLVAKEAVQIRENALEAARVVANKYVSRRAGASNYKLKLRIFPHHILREHKMAVGAGADRISQGMRAAFGKPVGRAARVKPGTKIMSVWVKPEHFEIAKEALRRAAMKMPTPTKIVVEK 165
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METTH (50S ribosomal protein L10e OS=Methanobacterium thermoautotrophicum GN=rpl10e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.639e-24 Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI YD+G +FP + + + ALEAARIA N+YM AG+ +HL++RV+P H++R N M + AGADR+Q GMR AFGKP T A V Q ++++ N A EALRRA KFP +I++ R Sbjct: 14 IPGSKIVQYDMGNLSA---EFPISLSVAVKAPTQITHNALEAARIASNRYMQRRAGRMGYHLKIRVYPHHIVRENPMATGAGADRVQDGMRKAFGKPVSTVALVKKNQKIITIETNKKNFKDAKEALRRAAMKFPVPCRIVIDR 154
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_META3 (50S ribosomal protein L10e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rpl10e PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.303e-23 Identity = 64/148 (43.24%), Postives = 85/148 (57.43%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 + +P PK+ Y G KG D FP VHLV + ALE+ARI NKY + G+ + ++RV+P VLR NKM S AGADR+ GMR +FGK GT ARV GQ ++++ N HA EALRR K P + KI++ + Sbjct: 22 YIRAVPQPKVVHYVNG--NKGGD-FPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCKIVIGK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THEVO (50S ribosomal protein L10e OS=Thermoplasma volcanium GN=rpl10e PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.103e-22 Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 F +P PKI + G +K+ FP + L++ E ALEAAR++ N+ M AG D F+L+V +P HVLR +KM + AGADR+ +GMR AFG+P GT ARV V++ R ++++H AL++A K P K+++++ Sbjct: 22 FMGGVPYPKITTFVQGNQKR---DFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIALKKAAIKLPTPCKVVITK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THEPD (50S ribosomal protein L10e OS=Thermofilum pendens (strain Hrk 5) GN=rpl10e PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.441e-22 Identity = 64/143 (44.76%), Postives = 81/143 (56.64%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 P I +D+G K F + LV + ALEAAR NKY+ + G+ F LRV V P H+LR NKM++ AGADRLQ GMR +FG P G ARV GQ+++ V+ N HA EALRRA K P +IIV + Sbjct: 27 PPVLIPKFDLGNPK---GNFNTVLKLVVMRPGQIRANALEAARQHANKYLTAKVGEANFFLRVAVFPHHILRENKMMAMAGADRLQDGMRLSFGTPVGRAARVEAGQIVMLVKVDAKNIDHAKEALRRAASKIPLPSRIIVEQ 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 1.881e-22 Identity = 60/148 (40.54%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 F +P PKI + G +KK FP + LV+ E ALEAAR++ N+ M AG D F+L+V +P HVLR +KM + AGADR+ +GMR AFG+P GT ARV V++ R ++++ ALR+A K P K+++++ Sbjct: 22 FMGGVPYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMIARTDEAHAKELKTALRKAAIKLPTPCKVVITK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRCJ (50S ribosomal protein L10e OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.209e-22 Identity = 66/151 (43.71%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 26 HFAAVLPDPKIRIYDVGMKKKGADQ-FPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 H A ++ PK +D+G A F LV+ E+ +ALEAAR +KY+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ V K + H EALRRA K P +I+V K Sbjct: 24 HGAPMIQIPK---FDMGTTSAAARAAFTMVAKLVAEERGQIRMQALEAARQISSKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYVEFKPEHLAHVKEALRRAASKLPIPTRIVVEPK 171
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THENV (50S ribosomal protein L10e OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl10e PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.191e-22 Identity = 64/151 (42.38%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 26 HFAAVLPDPKIRIYDVGMKKKGADQ-FPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 H A ++ PK +D+G A FP LV E+ +ALEAAR KY++ G ++LR+ P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ K + H EALRRA K P +I++ K Sbjct: 24 HGAPMIQIPK---FDMGTTSAAARAAFPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRIVIEAK 171
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_UNCMA (50S ribosomal protein L10e OS=Uncultured methanogenic archaeon RC-I GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.474e-22 Identity = 59/144 (40.97%), Postives = 84/144 (58.33%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P K+ +D+G ++ P V LV E +ALEAARI+ N+Y+ +D GK + +VRV+P VLR NK + AGADR+ GMR AFGK GT ARV GQ + ++ +N A EA+RRA K P +++V + Sbjct: 26 VPGVKVAQFDMGNL---TEELPIAVTLVVNETCQIRHDALEAARISANRYLLNDVGKTNYRFKVRVYPHQVLRENKQATGAGADRVSDGMRRAFGKAVGTAARVYEGQGVFTIWVNRANFEKAKEAMRRAGHKLPTPYRVVVEK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRAR (50S ribosomal protein L10e OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl10e PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 63/151 (41.72%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 26 HFAAVLPDPKIRIYDVGMKKKGADQ-FPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 H A ++ PK +D+G A FP L+ E+ +ALEAAR +KY+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQ+L K + H EA RRA K P +I++ K Sbjct: 24 HGAPMIQIPK---FDMGTTSAAARATFPMVAKLIVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVIPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQILFYAEFKPEHLAHIKEAFRRAASKLPLPTRIVIEPK 171 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |