CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRAE (50S ribosomal protein L10e OS=Pyrobaculum aerophilum GN=rpl10e PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 65/151 (43.05%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 26 HFAAVLPDPKIRIYDVGMKKKGA-DQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 H A ++ PK +D+G A F LV E+ +ALEAAR +KY+ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQVL K + H EALRRA K P +I++ K Sbjct: 24 HGAPMIQIPK---FDMGTTSAAARTAFTMTAKLVVEERGQIRMQALEAARQMASKYLTKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVLFYAEFKPEHLPHIKEALRRAASKLPLPTRIVIEPK 171
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METMP (50S ribosomal protein L10e OS=Methanococcus maripaludis GN=rpl10e PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.220e-21 Identity = 58/148 (39.19%), Postives = 85/148 (57.43%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 + +P PK+ Y +G + +FP V LVS ALE++RIA NKY+ S+ G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ + A EALRR K P KI+V++ Sbjct: 22 YVRAVPQPKVVHYVMG---NPSAEFPVQVQLVSKSDILIRHNALESSRIAGNKYILSECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLPTACKIVVTK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METJA (50S ribosomal protein L10e OS=Methanocaldococcus jannaschii GN=rpl10e PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.593e-21 Identity = 59/144 (40.97%), Postives = 83/144 (57.64%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P PK+ + +G +FP V+LV+ ALEAAR+A NKY+ G+ + ++RV+P +LR +KM + AGADR+ GMR AFGKP GT ARV GQ +L+V A EALRRA K P +I++ + Sbjct: 27 VPQPKVVHFIMGNLSA---EFPVKVNLVATRPIQIRHNALEAARVAANKYLTKMCGRMGYKFQIRVYPHQILREHKMATGAGADRISDGMRLAFGKPIGTAARVKEGQAILTVWVNPDKFPAAKEALRRAAMKLPVPCRIVIEQ 167
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METM5 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl10e PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.548e-21 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 + +P PK+ Y +G + +FP V LVS ALE++RIA NKY+ + G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ + A EALRR K P KI+V++ Sbjct: 22 YVRAVPQPKVVHYVMG---NSSVEFPVEVQLVSKSDILIRHNALESSRIAGNKYIMGECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPERFYAAKEALRRCSMKLPTACKIVVTK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRIL (50S ribosomal protein L10e OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.634e-21 Identity = 63/151 (41.72%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 26 HFAAVLPDPKIRIYDVGMKKKGADQ-FPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 H A ++ PK +D+G+ A F LV E+ +ALEAAR KY++ G ++LR+ V P HVLR N+ML+ AGADRLQ GMR AFG P G ARV GQV+ + + H EALRRA K P +I++ K Sbjct: 24 HGAPMIQIPK---FDMGVTSAAARAAFSMVAKLVVEERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLNVVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEPGQVIFYAEFRPEHIAHIKEALRRAASKLPLPTRIVIETK 171
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METM7 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 + +P PK+ Y +G + +FP V L+S ALE++RIA NKY+ + G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ + A EALRR K P KI+V++ Sbjct: 22 YVRAVPQPKVVHYVMG---NSSVEFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLPTACKIVVTK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METM6 (50S ribosomal protein L10e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 + +P PK+ Y +G + +FP V L+S ALE++RIA NKY+ + G+ + +RV+P +LR NKM + AGADR+ GMR +FGK GT A+V GQ ++++ + A EALRR K P KI+V++ Sbjct: 22 YVRAVPQPKVVHYVMG---NSSVEFPVEVQLISKSDILIRHNALESSRIAGNKYILRECGRTGYLFNIRVYPHEILRENKMAAGAGADRISDGMRLSFGKAVGTAAKVKKGQEIITIGVNPEKFYAAKEALRRCSMKLPTACKIVVTK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METMA (50S ribosomal protein L10e OS=Methanosarcina mazei GN=rpl10e PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 7.905e-21 Identity = 60/142 (42.25%), Postives = 84/142 (59.15%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIV 466 +P ++ YD+G K FP + LV+ EK ALEAARI N+++ +DAGK F++++RV+P VLR NK + AGADR+ +GMR AFGK GT ARV Q L +V + N A +AL A K P +I++ Sbjct: 26 VPGSQVIHYDMG--DKANTTFPVKISLVAEEKCQIRHTALEAARITANRHLVADAGKMGFYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNSMQKLFTVAVEKQNFPAAKKALWHAGQKLPTPVRIVI 165
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PICTO (50S ribosomal protein L10e OS=Picrophilus torridus GN=rpl10e PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.348e-20 Identity = 57/148 (38.51%), Postives = 87/148 (58.78%), Query Frame = 2 Query: 29 FAAVLPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 F +P PKI + G +KK F + LV+ E ALEAAR++ N+ + AG D + L++R +P V+R +KM + AGADR+ +GMR AFG+P GT ARV GQ+++ R +N+ +AL +A K P K++V++ Sbjct: 22 FMGGVPYPKITTFIQGNQKK---DFEIEMMLVAEEACQIRHTALEAARVSVNRKLLDAAGSDNYFLQIRPYPHQVIREHKMATGAGADRISSGMRAAFGRPVGTAARVYPGQIIMVGRVDRNNAKLLKDALHKASIKLPTPCKVVVTK 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METAC (50S ribosomal protein L10e OS=Methanosarcina acetivorans GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.923e-20 Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIV 466 +P ++ YD+G K FP + L+ EK ALEAARI N+++ +D GK F++++RV+P V+R NK + AGADR+ +GMR AFGK GT ARV Q + +V + N A EAL A K P +I+V Sbjct: 26 VPGSQVIHYDMG--DKANTSFPVKISLIVEEKCQIRHTALEAARITANRHLVADTGKMGFYMKLRVYPHEVIRENKQATGAGADRVSSGMRRAFGKNVGTAARVKPMQKIFTVAVEKQNFKAAKEALWHAGQKLPTPCRIVV 165 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |