CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THESM (50S ribosomal protein L10e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.124e-20 Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P P+I I+D+G A F F V L + E ALEAAR N+Y++ + G+ FH ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +L+VR + A A++RA KFP Sbjct: 27 PGPRITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARTQLNRYLSKNVGRSNFHYKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILTVRVNKQHLKFALAAMKRASMKFP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRFU (50S ribosomal protein L10e OS=Pyrococcus furiosus GN=rpl10e PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.692e-20 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G A F F V L + E ALEAAR N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +LS+R + A E RRA KFP Sbjct: 27 PGPKITIFDMG---NPAGDFEFEVSLHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRHO (50S ribosomal protein L10e OS=Pyrococcus horikoshii GN=rpl10e PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.740e-20 Identity = 57/134 (42.54%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G A F F V L + E ALEAAR N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +LS+R + A E RRA KFP Sbjct: 27 PGPKITIFDMG---NPAGDFEFEVALHTAEPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKRDQKILSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.141e-19 Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKF 493 +P KI YD+G + +FP V L E + S +LEAARIA N+Y+ GK + L++R +P H++R N M + AGADR+Q+GMRGAFGK + A V Q +++ + + A AL RA K P K+++ + +F Sbjct: 14 IPASKIVQYDMGNL---SGEFPLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKDFEKAKVALNRAAMKLPVTCKLVIDKGHDLVQF 161
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_HALMA (50S ribosomal protein L10e OS=Haloarcula marismortui GN=rpl10e PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 1.491e-19 Identity = 54/145 (37.24%), Postives = 81/145 (55.86%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI + +G K+K AD +P + L+ E +LEA+R++ N+++ + G++ + + +R P VLR NK + AGADR+ GMR AFGK GT ARV G+ L + C ++ H EA RRA K +I V R Sbjct: 26 IPGSKIAQHKMGRKQKDADDYPVQISLIVEETVQLRHGSLEASRLSANRHLIKELGEEGDYKMTLRKFPHQVLRENKQATGAGADRVSDGMRAAFGKIVGTAARVQAGEQLFTAYCNVEDAEHVKEAFRRAYNKITPSCRIKVER 170
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METS5 (50S ribosomal protein L10e OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl10e PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.543e-19 Identity = 59/144 (40.97%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVA-IGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIV 466 +P PKI + +G KK D F V L++ + ALEAAR+ K M S G + F+L V +P HV+R NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++++R K + A +A + A K P +I+V Sbjct: 26 VPQPKITKFTMGDHKKDYD---FEVRLLTKQIGQIRHNALEAARVIALKQMTSMVGNETDFYLYVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARITKLGDLIMAIRVKKEHLEFAKKAFKVASSKLPLDTEIVV 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METBU (50S ribosomal protein L10e OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl10e PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 3.321e-19 Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P ++ +D+G K AD FP + L++ E+ ALEAARI N+ M + AG+ FH+++RV+P VLR NK + AGADR+ +GMR A+GK T ARV+ Q + ++ + A +ALRRA K P I+V + Sbjct: 26 VPGSQVIHFDMG--NKTAD-FPVKITLLADERCQIRHTALEAARITANRAMTTAAGRSGFHMKLRVYPHEVLRENKQATGAGADRVSSGMRAAYGKNVSTAARVSARQKIFTISVNKEHFIIAKDALRRAGQKLPTPVTIVVDQ 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULAC (50S ribosomal protein L10e OS=Sulfolobus acidocaldarius GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.665e-19 Identity = 61/145 (42.07%), Postives = 86/145 (59.31%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASD-AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVS 469 +P PKI + +G D + + L++ EK ALEAAR+ KY++ A + F L V +P HV+R NKM++ AGADRLQ GMR +FGKP GT AR+ +G++++ VR K + A EAL+ A K P R KI +S Sbjct: 26 IPMPKITKFVMGNVNGDYD---YELRLITTEKGQIRHNALEAARVIALKYLSKKLASEQNFALVVTKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARLEKLGELVMYVRVKKEHLEAAKEALKIASSKLPIRTKIEIS 167
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRAB (50S ribosomal protein L10e OS=Pyrococcus abyssi GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 5.665e-19 Identity = 56/134 (41.79%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G A F F V L + ALEAAR N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G AR+ Q +LS+R + A E RRA KFP Sbjct: 27 PGPKITIFDMG---NPAGDFEFEVALHVSQPVQIRQNALEAARQQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARLKKDQKVLSIRVNRQHLKFAIEGARRAAMKFP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METPE (50S ribosomal protein L10e OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.399e-19 Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI +++G + +FP + L E ALEAARIA N+ M G+ FH ++R +P HVLR NK + AGADR+ GMR AFGK GT ARV Q + +V + + +ALR +K P ++++ R Sbjct: 26 VPGSKIVQFEMGNLSQ---EFPVEISLEVLESCQIRHTALEAARIAINRKMMDQVGRANFHFKIRTYPHHVLRENKQATGAGADRVSEGMRMAFGKAVGTAARVQPKQKVFTVYTNEQYIEKSKDALRHGGYKLPSPARLVIER 166 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |