CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_CALMQ (50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 7.399e-19 Identity = 59/145 (40.69%), Postives = 82/145 (56.55%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKK-KGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 P +I +++G K K ++F L E ALEAAR KY++ F+L++ +P HV+R NKML+ AGADRLQ GMR AFG P G ++ G+VL+ V +D N HA EAL RA+ K P +I ++RK Sbjct: 26 PYVQIPRFEMGATKAKDRERFTSVAVLRVLEGGQIRVNALEAARQMAYKYLSKVLTDQNFYLKIIKYPHHVIRENKMLAMAGADRLQEGMRLAFGVPTGRAIQIEPGEVLMIVEVEDRNITHAKEALNRARAKLPLPCRIELTRK 170
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THEON (50S ribosomal protein L10e OS=Thermococcus onnurineus (strain NA1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 9.663e-19 Identity = 54/134 (40.30%), Postives = 74/134 (55.22%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G +F + V L + + ALEA RI N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G ARV Q +L+V + + A EA+RRA K P Sbjct: 27 PGPKITIFDMGNLSA---EFQYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEGHLKFALEAMRRAAMKLP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METBF (50S ribosomal protein L10e OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl10e PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.648e-18 Identity = 56/142 (39.44%), Postives = 81/142 (57.04%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIV 466 +P ++ YD+G K FP + L+ EK ALEAARI N+++ D GK +++++RV+P VLR NK + AGADR+ +GMR AFGK GT ARV Q + +V + N A +AL A K P +I++ Sbjct: 26 VPGSQVIHYDMG--DKANTSFPIKLSLLVEEKCQIRHTALEAARITANRHLIEDTGKMGYYMKLRVYPHEVLRENKQATGAGADRVSSGMRRAFGKNVGTAARVNPFQKIFTVAVEKQNFVAAKKALWHAGQKLPTPCRIVI 165
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METLZ (50S ribosomal protein L10e OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl10e PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.153e-18 Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIV 466 +P K+ +D+G ++ FP +HL + E A+EAARI N+ + G++ FHL++R +P HVLR +K + AGADR+ GMR AFGK GT ARVA Q + +V A +AL + +K P ++IV Sbjct: 26 VPGLKVVQFDMGNL---SEDFPVAIHLEALEACQIRHTAMEAARINMNRRLMKTVGRNNFHLKIRAYPHHVLREHKQATGAGADRVSEGMRLAFGKAVGTAARVAPRQRVFTVWTTPQYVDQAKDALLHSGYKLPTPVRVIV 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_THEGJ (50S ribosomal protein L10e OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18 Identity = 53/134 (39.55%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G +F + V L + + ALEA RI N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G ARV Q +L+V + + A A+ RAK K P Sbjct: 27 PGPKITIFDMGNLSA---EFEYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVKKDQKILTVWVNEQHLKFALGAMHRAKMKLP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METMJ (50S ribosomal protein L10e OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 4.796e-18 Identity = 56/144 (38.89%), Postives = 77/144 (53.47%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI +D+G + +P + +V E ALEAARI N+ + + G+ FHL++R P HVLR NK + AGADR+ GMR AFGK GT ARV GQ + SV A +L+R +K P +I+ R Sbjct: 26 VPGSKIVQFDMGNL---TEDYPVELSIVVDETCQIRHTALEAARIGINRQLQKEVGRANFHLKIRTFPHHVLRENKQATGAGADRVSEGMRLAFGKAVGTAARVEKGQKVFSVWTSPQYVDKAKVSLKRGIYKLPTPARIVEER 166
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_PYRKO (50S ribosomal protein L10e OS=Pyrococcus kodakaraensis GN=rpl10e PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.068e-17 Identity = 53/134 (39.55%), Postives = 72/134 (53.73%), Query Frame = 2 Query: 44 PDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFP 445 P PKI I+D+G +F + V L + + ALEA RI N+Y+ + G+ +H ++RV+PF VLR N M + ADR GMR FGKP G ARV Q +L+V + A A+ RAK K P Sbjct: 27 PGPKITIFDMGNLSA---EFEYEVSLHAEQAMQIRQNALEAIRIQVNRYLQKNVGRSNYHFKIRVYPFQVLRENPMATGRKADRYGNGMRRPFGKPIGLAARVRKDQKILTVWVNGQHLKFALGAMHRAKMKLP 157
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.395e-17 Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI + +G + AD +P + LV E+ +LEAAR++ N+++ + G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + EA RRA K KI V R Sbjct: 26 IPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.395e-17 Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI + +G + AD +P + LV E+ +LEAAR++ N+++ + G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ + EA RRA K KI V R Sbjct: 26 IPGSKIAQHKMGDLQADADDYPVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCEVEQAAAVKEAFRRAYNKITPPCKINVER 169
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 4.060e-17 Identity = 52/145 (35.86%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSRK 475 +P K+ +D+G +FP V LV E ALEAAR++ N+ + + G+ +HL++R +P HVLR NK + AGADR+ GMR AFGK GT AR Q + +V ++ +ALR K P +++ K Sbjct: 26 IPGVKVVHFDMGNL---TSEFPMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTVFSNPASVEKIKDALRHGGHKLPSPTHLVIEMK 167 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |