CF832341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULTO (50S ribosomal protein L10e OS=Sulfolobus tokodaii GN=rpl10e PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.044e-17 Identity = 56/142 (39.44%), Postives = 79/142 (55.63%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + +G D + + LV+ EK ALEAAR+ K + + G D F L V +P HV+R NKM++ AGADRLQ GMR +FGKP GT AR+ +G +++ + K + A +A A K P + KI Sbjct: 26 VPMPKITKFTMGNVNGNYD---YELRLVALEKGQIRHNALEAARVLALKQLTNKTGSDQNFALIVLKYPHHVIRENKMMAFAGADRLQDGMRLSFGKPIGTAARIERLGDIIMIAKVKKEHLEIAKKAFEAAASKIPLKTKI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.437e-16 Identity = 51/151 (33.77%), Postives = 83/151 (54.97%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRA--KFKFPGR------QKIIVS 469 +P KI +++G + G +P + L E+ +LE+AR++ N+ M G+D + + +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A + LRRA K P R QK+++S Sbjct: 26 IPGSKIAQHNMGNLQTGPQDYPVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKDGLRRAYNKMSPPCRIDVEKGQKLLIS 176
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIY (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIN (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIM (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIL (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIK (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULIA (50S ribosomal protein L10e OS=Sulfolobus islandicus (strain M.16.27) GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.656e-16 Identity = 55/142 (38.73%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K + G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G++L+ V+ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTITLKTLTKRTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGEILIVVKVKKEHLDFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_SULSO (50S ribosomal protein L10e OS=Sulfolobus solfataricus GN=rpl10e PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.000e-15 Identity = 54/142 (38.03%), Postives = 78/142 (54.93%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKD-AFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARV-AIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKI 460 +P PKI + G D + V L++ E ALEA R K ++ G + +F + + +P HVLR NKM++ AGADRLQ GMR +FG P GT AR+ +G+ L+ ++ K + A EAL+ A K P R +I Sbjct: 26 IPQPKITKFTSGNPNGDYD---YEVRLITTEIGQIRHNALEAVRTLTLKTLSKKTGSETSFFMWILKYPHHVLRENKMMAFAGADRLQDGMRLSFGTPIGTAARIEKLGETLIVIKVKKEHLEFAKEALKIASKKLPLRTRI 164
BLAST of CF832341 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.465e-15 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 2 Query: 41 LPDPKIRIYDVGMKKKGADQFPFCVHLVSWEKENESSEALEAARIACNKYMASDAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAHEALRRAKFKFPGRQKIIVSR 472 +P KI +++G D +P + L E+ +LE++R++ N+++ + G+ + + +R P V+R NK + AGADR+ GMR AFGKP GT AR+ ++ + C + EA RRA K +I V R Sbjct: 26 IPGSKIAQHNMGDLSAEPDDYPVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYCDVEQASVVKEAFRRAYNKLSPPCRITVDR 169 The following BLAST results are available for this feature:
BLAST of CF832341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832341 ID=CF832341; Name=CF832341; organism=Citrus sinensis; type=EST; length=574bpback to top |