CF832355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_AERPE (30S ribosomal protein S2P OS=Aeropyrum pernix GN=rps2p PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.529e-29 Identity = 70/185 (37.84%), Postives = 105/185 (56.76%), Query Frame = 3 Query: 66 AEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 A V GT+ C M ++V + +G Y ++ K E+L MAA+ + E P I V S R YGQ+ V + AI GR PGTFTN + EP ++++TDPR D Q + EA+ IP +A DTD+ + +D+ IPANN+G+ S+ ++W+L R +L+ RG ++P DV + F R Sbjct: 18 AGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVRIYGQKPVRMMCERVGCKAITGRIIPGTFTNPNLEHYVEPDVVVVTDPRMDRQAVVEASKVGIPVVALVDTDNSIENIDLVIPANNRGRRSLALIYWILTREILRRRGVLKPDEDLDVSYEEFMAR 201
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_NATPD (30S ribosomal protein S2P OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rps2p PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.998e-29 Identity = 65/173 (37.57%), Postives = 104/173 (60.12%), Query Frame = 3 Query: 48 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 566 ++ LAA VH+GT+ M+R++ + R DG+Y++++ +T ++++ AA + + P I+V S+R YG+ KFA A A GR PGT TN + EP ++++TDP D Q +KEA IP IA CD+++ VD+ +P NNKG+ ++ ++WLLA L RG Sbjct: 92 VEDYLAAGVHIGTQQKTKSMDRFIHRVRTDGLYVLDVSQTDQRIRTAASFLSNYQ-PEQILVASSRQYGRFPAEKFADAVGARARTGRFIPGTLTNPDYDGYIEPDVVVVTDPIGDSQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVIYWLLANETLDRRG 263
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_HALMA (30S ribosomal protein S2P OS=Haloarcula marismortui GN=rps2p PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 2.609e-29 Identity = 69/182 (37.91%), Postives = 105/182 (57.69%), Query Frame = 3 Query: 33 QKEAD----IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG 566 Q EAD ++ L A VH+GT+ MER++ + R DG+Y++++ T E+++ AA + E P I+ S+R YG+ KFA+ A GR PGT TN + EP ++++TDP D Q +KEA IP IA CD+++ VD+ +P NNKG+ ++ ++WLLA L RG Sbjct: 73 QSEADLLIPVEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQILAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAVKEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVYWLLANETLDRRG 253
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_METLZ (30S ribosomal protein S2P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps2p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.407e-29 Identity = 67/183 (36.61%), Postives = 109/183 (59.56%), Query Frame = 3 Query: 24 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 572 +L++ ++ LAA VH+GT+ D M+ ++++ R+DG+YII++ KT E+++ A+ + E P I V ++R YGQ KFA A + GR PGT TN + EP ++I+TDP D Q I EA +P IA CD ++ VD+ IP NNKG+ ++ +++LL + L+ +G + Sbjct: 9 ELNEPLVSVEEYLAAGVHIGTQQKDNDMKDFIYRVRSDGLYIIDIRKTDERIKQVAKFLARYE-PAKIFVVTSRQYGQYPAQKFADTIGALSHVGRFIPGTLTNPKLPKYVEPSVVIVTDPIGDAQVITEAVQCGMPVIALCDINNRTNNVDLVIPTNNKGRKALSMVYFLLTKEFLRQKGIV 190
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_KORCO (30S ribosomal protein S2P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps2p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.914e-29 Identity = 68/176 (38.64%), Postives = 103/176 (58.52%), Query Frame = 3 Query: 51 QMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP 578 Q L + VH+GT ME+++++ R DG+ II++ K E+++ A + + + P ++ SAR YG + V KFA+YT A I GR PGT TN EP +++L+DPR D Q E+ IP +A D D+ + +D+ IP NNKG+ S+ ++WLL R VL+ R I P Sbjct: 24 QKYLLSGVHVGTGIRTKDMEKFIYRVRPDGLCIIDIRKIDERIRTAGKFLARFD-PDRVLAVSARIYGFKPVRKFAEYTGAMYITGRILPGTLTNPQAPLHLEPDVVLLSDPRVDRQIHIESVRMGIPVVALVDADNMLENIDLAIPVNNKGRRSLALVYWLLTREVLRNRKVIPP 198
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ENCCU (40S ribosomal protein S0 OS=Encephalitozoon cuniculi GN=RPS0 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.884e-28 Identity = 66/188 (35.11%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 3 EQQRLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRR-NDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR 563 + R+ + + +++++ ++ HLG + + RY++ R D I II++ TWEKL +AAR I++P I V S + +G++ V+KF + A I GR PG+FTN +PR+LI++D D Q I E+ N+PTIAF +TD+ + VDI IP NN+ +I F++L+R++ M+ Sbjct: 4 DNTRISDSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARAFCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIVSDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAIAAGFFILSRLINYMK 191
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_NANEQ (30S ribosomal protein S2P OS=Nanoarchaeum equitans GN=rps2p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.767e-28 Identity = 65/188 (34.57%), Postives = 106/188 (56.38%), Query Frame = 3 Query: 48 IQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 611 I + + A +H+GT++ M+ YV K R DG+ I ++ K E+L++A++++ E P +I+V R + KF++ T A GR+ PGT TN + EP ++++TDP D + +A I +A CDT+ Y+D IPANN+G S+ ++W+LAR L+ RG I + V V+ F Sbjct: 7 INVYVKAGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRRETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYESGITILALCDTNHTKNYIDFCIPANNRGSKSLALIYWILAREYLRNRGVIGKDEQLKVPVEEF 193
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_NITMS (30S ribosomal protein S2P OS=Nitrosopumilus maritimus (strain SCM1) GN=rps2p PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.300e-24 Identity = 59/187 (31.55%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 57 MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVI--VAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLF 611 +L+ + +GT+ M ++ K +G+Y+++L T +K++ AA+ I + +EN +IV S R Y + + KF + + + GR PGT TN + EP+L++++DP+ D Q I EA IP I +TD+ +D+ IPANN+G+ ++ ++WLL R +L +G ++ ++ +D F Sbjct: 14 ILSTGIRVGTQVKTKFMRPFITKASPEGLYMLDLDITLDKIKTAAKFINRLGVEN---LIVCSGRQYAETPIEKFCETLGSKKLLGRFMPGTLTNPSLPYYIEPKLVLISDPQVDEQAITEATNAGIPVIGIANTDNITSNLDVIIPANNRGRKALATVYWLLVRQILIEKGELKEEDPMNIEIDDF 197
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RS2_CENSY (30S ribosomal protein S2P OS=Cenarchaeum symbiosum GN=rps2p PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.099e-19 Identity = 56/175 (32.00%), Postives = 97/175 (55.43%), Query Frame = 3 Query: 54 MMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPG--DIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI 572 ++ + + +GT+ M++++ G Y ++L T +++ AA+ I E+ G ++IV S + + + KFA+ I R PGT TN + EP+LL++ DP+ D Q + EA IP I ++D+ +D+ IPANN+G+ ++ +FWLLAR VL +RG + Sbjct: 15 LITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEATQGRIKAAAQFI---EHTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQVDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFWLLAREVLVIRGEV 186 The following BLAST results are available for this feature:
BLAST of CF832355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832355 ID=CF832355; Name=CF832355; organism=Citrus sinensis; type=EST; length=743bpback to top |