CF832355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ASPCL (40S ribosomal protein S0 OS=Aspergillus clavatus GN=rps0 PE=3 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.851e-68 Identity = 125/204 (61.27%), Postives = 157/204 (76.96%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 5 QLPPMFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_UNCRE (40S ribosomal protein S0 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS0 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 125/203 (61.58%), Postives = 157/203 (77.34%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 LP + D++M+LAA+ HLG+KN M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 6 LPPVFNATSQDMEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLATRETEWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PARBP (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS0 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 125/203 (61.58%), Postives = 156/203 (76.85%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 620 LP + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 6 LPPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRESEWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PARBD (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS0 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 125/203 (61.58%), Postives = 156/203 (76.85%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 LP + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 6 LPPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PARBA (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS0 PE=3 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 125/203 (61.58%), Postives = 156/203 (76.85%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 LP + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 6 LPPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_MACHI (40S ribosomal protein SA OS=Maconellicoccus hirsutus PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 125/198 (63.13%), Postives = 152/198 (76.77%), Query Frame = 3 Query: 27 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 L E DI ML+A HLG +N +FQME+Y++KRR+DGI I NL KTWEKL +AAR I A+E+ +I V S+RP+GQRAVLKFA +T A IAGR TPG FTNQ+Q +F EPRLL++TDP D QPI EA+ NIP IAFC+TDSP+RYVDI IP N K HSIG ++WLLAR VL++RG+I KWDV+VDLFFYR Sbjct: 8 LKLTEGDITKMLSANTHLGAENTNFQMEQYIYKRRSDGINIFNLRKTWEKLLLAARAIAAVEHAAEIFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPAEDKQPITEASYVNIPVIAFCNTDSPLRYVDIAIPCNTKSAHSIGLMWWLLAREVLRLRGSIPRDGKWDVVVDLFFYR 205
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ANOGA (40S ribosomal protein SA OS=Anopheles gambiae GN=AGAP011777 PE=3 SV=3) HSP 1 Score: 258.07 bits (658), Expect = 3.724e-68 Identity = 123/198 (62.12%), Postives = 157/198 (79.29%), Query Frame = 3 Query: 27 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 LS KE D+ MLAA H+G+ + +FQME+YV+KRR DG++IINLG+T+EKL +AAR I +IE PG++ S+RPYGQRAVLK+A YT A IAGR TPG FTNQ+QT+F EPRLLI+TDP TDHQP+ EA+ NIP IAFC+TDSP+++VDI IP N K HSIG ++W+LAR VL++RG I +W+VM DLFF+R Sbjct: 8 LSLKEDDVTKMLAATTHIGSTSVNFQMEQYVYKRRTDGVHIINLGRTYEKLLLAARCIASIEYPGEVFAISSRPYGQRAVLKYAHYTQATPIAGRFTPGAFTNQIQTTFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPVKFVDIAIPCNTKSTHSIGLMWWMLAREVLRLRGKI-THDRWEVMPDLFFFR 204
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_PYRTR (40S ribosomal protein S0 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps0 PE=3 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 4.863e-68 Identity = 132/243 (54.32%), Postives = 167/243 (68.72%), Query Frame = 3 Query: 15 LPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYRXXXXXXXXXXXXXXXIDYATAEYSMNLTSGEQWPSQIADG 740 LP + + DI+M+LAA+ HLG KN ME Y++K R DG+ ++N+GKTWEK+ +AAR+IVAI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CD DSP YVD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDVM DL+FYR D A E + + E P+ +ADG Sbjct: 6 LPAIFNPTQQDIEMLLAAQCHLGAKNLQVHMEPYLWKTRPDGVNVLNIGKTWEKIVLAARIIVAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFREPRLVIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLANRETEWDVMTDLYFYRDPEAEENK--------DSAGVEEAKVPGADEVGPAAVADG 240
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA_ASPNC (40S ribosomal protein S0 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=rps0 PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 8.296e-68 Identity = 125/204 (61.27%), Postives = 156/204 (76.47%), Query Frame = 3 Query: 12 RLPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 620 +LP + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ WDV+VDL+FYR Sbjct: 5 QLPPIFNPTSQDIEMLLAAQCHLGSKNLQSHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLASREVDWDVVVDLYFYR 208
BLAST of CF832355 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHJY (40S ribosomal protein S0-A OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0a PE=3 SV=1) HSP 1 Score: 256.914 bits (655), Expect = 8.296e-68 Identity = 122/201 (60.70%), Postives = 154/201 (76.62%), Query Frame = 3 Query: 18 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 620 P L+ + DI+ +LAA H+G+KN D +ME YV+KRR+DG++IIN+GKTWEK+ +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+I TDPR D Q IKEA+ NIP I+ CDTDSP+ +VD+ IP NNKG SIG ++WLLAR VL++RGTI WDVMVD++FYR Sbjct: 7 PSILNATDDDIKQLLAASCHIGSKNLDVRMENYVWKRRSDGVHIINIGKTWEKIVLAARVIATIENPADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIATDPRADAQAIKEASYVNIPVISLCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLRLRGTISRTSPWDVMVDMYFYR 207 The following BLAST results are available for this feature:
BLAST of CF832355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832355 ID=CF832355; Name=CF832355; organism=Citrus sinensis; type=EST; length=743bpback to top |