CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1010 contig Csv1_Contig1010:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.327e-65
Identity = 125/241 (51.87%), Postives = 163/241 (67.63%), Query Frame = 2
Query:   11 TDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDR---VVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            T R++LQS  D +    S ++TV  +GTG+FTTI  AI  APN +D      +I +  G+YEE +E+P  K  + ++G G + T+IT +RSV DGWTTF SAT  +SG  F+  ++TI N AGP K QAVALR   D +  + CSF  YQDTLY HS RQFYRECDVYGT+D+IFGNAAVVLQ CN+  R P  GQ   +TAQ + DPN+NTG +I  C+I   +DL  ++ +VK+YLGRP
Sbjct:  228 TRRKLLQS--DADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRP 466          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.855e-64
Identity = 128/237 (54.01%), Postives = 165/237 (69.62%), Query Frame = 2
Query:   14 DRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            DR++LQ+   DN      V  V ADGTG+FTTI+DA+  AP+ S  R VI++K+GVY EN+EI   K NI ++G G D+T+IT +RS  DGWTTFRSAT AVSG  F+ARD+T +N AGPEK+QAVA+R + D    +RC+  GYQDTLY HS RQF+REC + GT+D+IFG+A  V Q+C I ++  LP Q   ITAQ + DPNE TG +IQ  +I A  DL  N  +  +YLGRP
Sbjct:  201 DRKLLQT---DNITVADAV--VAADGTGNFTTISDAVLAAPDYSTKRYVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRGYQDTLYAHSMRQFFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRP 432          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.164e-64
Identity = 124/243 (51.03%), Postives = 163/243 (67.08%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            LS  D+R+L++   +  Y+    L+V  DGTG+FTTI DA+  APN S+ R +I IK G Y EN+E+P  KT I  +G G   T+I  +RS  DGW+TF++ TV V G  ++A+D++  N AGP K QAVA R  +D +A +RC F GYQDTLYVHS +QFYRECD+YGTID+IFGNAAVV Q  ++ +R P PG     TAQ ++  ++ TGISI NC ILA  DL     + K+YLGRP R
Sbjct:  203 LSENDQRLLEAPVQETNYN----LSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWR 441          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.164e-64
Identity = 123/224 (54.91%), Postives = 159/224 (70.98%), Query Frame = 2
Query:   62 SQVLTVDADGTGDFTTITDAINFAPNNS---DDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            S+ + V    + +FTTITDAI  APNN+   D   VI  ++GVYEE + +P  K N+ L+G G + TIIT + +V DGWTT+  ++ AV G+RF+A D+T  N AGPEK+QAVALR NA+ ++ +RCSF GYQDTLYVHS RQFYRECD+YGT+D+IFGNAA + Q CNI +R P+  Q   ITA  + DPN+NTGISI NC+I A  DL A   S  ++LGRP
Sbjct:  300 SKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRP 523          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 5.397e-64
Identity = 128/237 (54.01%), Postives = 161/237 (67.93%), Query Frame = 2
Query:   14 DRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            DR++LQ++   N       + V  DG+G+  TI +A+  A      R VI IK G Y EN+E+     NI  +G G   TIIT S+SVG G TTF+SATVAV GD F+ARD+TI N AGP  +QAVALR  +D +  +RCSF GYQDTLYVHS RQFYRECD+YGT+D+IFGNAAVVLQ CNI +R P P +   +TAQ + DPN++TGI I NC + A  DL    +SVK++LGRP
Sbjct:  191 DRKLLQTTPRAN-------IVVAQDGSGNVKTIQEAVAAASRAGGSRYVIYIKAGTYNENIEVKL--KNIMFVGDGIGKTIITGSKSVGGGATTFKSATVAVVGDNFIARDITIRNTAGPNNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSQRQFYRECDIYGTVDFIFGNAAVVLQNCNIFARKP-PNRTNTLTAQGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRP 417          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.397e-64
Identity = 126/241 (52.28%), Postives = 169/241 (70.12%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            L+  DR++L+SS    +   + V  V  DGTG F T+ +A+  AP NS+ R VI +K+GVY+E ++I   K N+ L+G GKD+TIIT S +V DG TTFRSATVA +GD F+A+D+  +N AGP K+QAVALRV+AD   + RC    YQDTLY H+ RQFYR+  + GT+D+IFGN+AVV Q C+IV+R P  GQ  ++TAQ ++D N+NT ISIQ C I A+ DL     SVK++LGRP
Sbjct:  226 LTALDRKLLESSPKTLKVTANVV--VAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVYKETIDIGKKKKNLMLVGDGKDATIITGSLNVIDGSTTFRSATVAANGDGFMAQDIWFQNTAGPAKHQAVALRVSADQTVINRCRIDAYQDTLYTHTLRQFYRDSYITGTVDFIFGNSAVVFQNCDIVARNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRP 464          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.794e-63
Identity = 127/241 (52.70%), Postives = 160/241 (66.39%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  DRR+LQSS    +      + V ADG+GD+ T+++A+  AP  S  R VI IK GVY EN+++P  KTNI  +G GK +TIIT SR+V DG TTF SATV     + LARD+T +N AG  K+QAVAL V +D +A +RC    YQDTLYVHS RQF+ +C V GT+D+IFGN A V Q C+I +R P  GQ  ++TAQ + DPN+NTGI IQ C I AT DL     S  +YLGRP
Sbjct:  256 LSAGDRRLLQSSTVTPD------VVVAADGSGDYKTVSEAVRKAPEKSSKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRP 490          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.794e-63
Identity = 125/241 (51.87%), Postives = 161/241 (66.80%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            L+ TD  ++   D    +  +    V  DG G + TI +AIN APN+S  R VI +K+GVY+EN+++   KTNI L+G G   TIIT  R+   G TTFR+ATVAVSG  F+A+D+T  N AGP+  QAVALRV++D +A +RCS  GYQDTLY HS RQFYR+C++YGTID+IFGN A VLQ C I +R+PLP Q   ITAQ +  PN+NTG  IQN  +LAT+          +YLGRP
Sbjct:  221 LTETDESLMMRHDPSVMHPNT---VVAIDGKGKYRTINEAINEAPNHSTKRYVIYVKKGVYKENIDLKKKKTNIMLVGDGIGQTIITGDRNFMQGLTTFRTATVAVSGRGFIAKDITFRNTAGPQNRQAVALRVDSDQSAFYRCSVEGYQDTLYAHSLRQFYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRP 449          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 1.736e-62
Identity = 127/237 (53.59%), Postives = 162/237 (68.35%), Query Frame = 2
Query:   14 DRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            DR++L+S+     YD S  L    DGTG+FT I DAI  AP+ S  R VI IK+G+Y EN+EI   K NI +LG G D T+I+ +RS  DGWTTFRSAT AVSG  FLARD+T +N AGPEK+QAVALR ++D +  FRC+  GYQDTLY H+ RQFYREC + GT+D+IFG+  VV Q C I+++  LP Q   ITAQ + D N+ +G SIQ  +I A  DL     + ++YLGRP
Sbjct:  200 DRKLLESNG--RTYDVSVAL----DGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRGYQDTLYTHTMRQFYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRP 430          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.268e-62
Identity = 118/219 (53.88%), Postives = 155/219 (70.78%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEEN-LEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            + V  DG G   TI++AI  AP NS  R++I +K G YEEN L++   K N+  +G GK  T+I+  +S+ D  TTF +A+ A +G  F+ARD+T EN AGP K+QAVALR+ AD A ++RC+  GYQDTLYVHS RQF+RECD+YGT+D+IFGNAAVVLQ C+I +R P+  Q   ITAQ + DPN+NTGISI    +LA  DL A + S ++YLGRP
Sbjct:  285 IIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRP 503          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME20_ARATH8.327e-6551.87Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME32_ARATH1.855e-6454.01Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH3.164e-6451.03Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME25_ARATH3.164e-6454.91Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME2_CITSI5.397e-6454.01Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME18_ARATH5.397e-6452.28Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PMEU1_SOLLC7.794e-6352.70Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME22_ARATH7.794e-6351.87Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME44_ARATH1.736e-6253.59Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME34_ARATH2.268e-6253.88Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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