CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.346e-57
Identity = 116/241 (48.13%), Postives = 159/241 (65.98%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DR++++SS  D   +      V  DGTG + T+ +A+  AP+ S  R VI +K+G+Y+EN+E+ S K  + ++G G  +TIIT + +V DG TTF SAT+A  G  F+ +D+ I+N AGP K+QAVALRV AD + + RC    YQDTLY HS RQFYR+  V GTID+IFGNAAVV Q C +V+R P   Q  ++TAQ + DPN+ TG SIQ C+I+A+ DL        +YLGRP
Sbjct:  219 VSSRDRKLMESSGKDIGANA----VVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKENVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRP 455          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.346e-57
Identity = 116/241 (48.13%), Postives = 157/241 (65.15%), Query Frame = 2
Query:    5 SRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAI-NFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            S   RR+L++  ++   D      V  DG+G   TI +A+ + +  +S  R  I +K G Y EN+ IP+ + N+ L+G GK  T+I  SRS   GWTT+++ATVA  G+ F+ARD+T  N AGP+  QAVALRV AD + + RCS  GYQD+LY HS RQFYRE D+ GT+D+IFGN+AVV Q+CNI +R PLPGQ   +TAQ + +P +NTGI+IQNC I         +A   +YLGRP
Sbjct:  196 SSEQRRLLEAPVEELNVDA----VVAPDGSGTHKTIGEALLSTSLASSGGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRI---------TAESMTYLGRP 423          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.424e-56
Identity = 115/219 (52.51%), Postives = 145/219 (66.21%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSD---DRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+    TI  A+           +RV+I IK GVY E +EI  +  NI L+G G D TI+T +R+V DG TT+ SAT  VSGD F ARD+T EN AGP K+QAVALRV++D +  +RCSF GYQDTL+ HS RQFYR+  +YGTID+IFG+AA V Q C+I  R P+  Q  +ITAQ +DDP+ N+GISIQ+  I A  +  A     KSYLGRP
Sbjct:  208 VARDGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRP 426          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.859e-56
Identity = 121/243 (49.79%), Postives = 154/243 (63.37%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNN--SDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +SR +RR+LQ             L V  DG+G F T+  AI+ A     +  R VI +K+G+Y+ENL +     NI L+G G   TIIT  RSV  G+TT+ SAT  + G  F+A+ +  +N AGP K QAVALR ++D +  +RCS  GYQDTL VHS RQFYREC +YGT+D+IFGNAAVV Q C I+ RLPL GQ  VITAQ + D  +NTGISI N  I+   DL     SVK+Y+GRP
Sbjct:  209 VSRKERRLLQLQSVRAN------LVVAKDGSGHFKTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENLNVRLNNDNIMLVGDGMRYTIITGGRSVKGGYTTYSSATAGIEGLHFIAKGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRP 445          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.171e-56
Identity = 116/241 (48.13%), Postives = 159/241 (65.98%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DR++++SS  D   ++     V  DGTGD+ T+ +A+  AP+ +  R VI +K G+Y+EN+ +   K N+ ++G G ++TIIT S +V DG +TF S T+A  G  F+ +D+ I+N AGPEK QAVALRV AD + + RC    YQDTLY HS RQFYR+  V GT+D+IFGNAAVV Q C IV+R P   Q  ++TAQ + DPN+ TG SIQ C I+A+ DL       K+YLGRP
Sbjct:  214 VSSRDRKLMESSGKDIIANR----VVAQDGTGDYQTLAEAVAAAPDKNKTRYVIYVKMGIYKENVVVTKKKMNLMIVGDGMNATIITGSLNVVDG-STFPSNTLAAVGQGFILQDICIQNTAGPEKDQAVALRVGADMSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRP 449          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.574e-55
Identity = 112/236 (47.46%), Postives = 154/236 (65.25%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR+LQS+D     D    + V  DG+G + TI  A+   P  S+ R +I +K+GVY EN+++     N+ ++G G+  +I++   +V DG  TF++AT AV G  F+ARD+   N AGP K+QAVAL V+AD  A +RC+ + YQDTLYVH+ RQFYREC + GT+D+IFGN+A VLQ+C I+ R P+ GQ   ITAQ + DPN NTGISI  C+I    DL      V ++LGRP
Sbjct:  242 RRLLQSTDLRKVAD----IVVAKDGSGKYRTIKRALQDVPEKSEKRTIIYVKKGVYFENVKVEKKMWNVIVVGDGESKSIVSGRLNVIDGTPTFKTATFAVFGKGFMARDMGFINTAGPSKHQAVALMVSADLTAFYRCTMNAYQDTLYVHAQRQFYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDL----TDVMTFLGRP 469          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 2.056e-55
Identity = 112/222 (50.45%), Postives = 144/222 (64.86%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNN--SDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + V  DG+GD+ TI +A+N A        R VI++KQGVYEE + +     NI + G G   TIIT  +S G G++T++SAT    GD F+ RD+TI N AGPE +QAVALR N+D +  +RCS  GYQDTLYVHS RQF+RECD+YGT+D+IFGNAA VLQ C I +R P P     ITAQ + +PN+ TGI I N  +     +      VK+YLGRP R
Sbjct:  165 VVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSRFNPNQTTGIVIHNSVVKGAPGV--QLGGVKTYLGRPWR 383          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.506e-55
Identity = 104/236 (44.07%), Postives = 153/236 (64.83%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR+L +   + + D    + V  DG+G + TI +A+NF P   +   V++IK+G+Y+E +++    T++  +G G D T+I+ S+S  DG TT+++ATVA+ GD F+A+++  EN AG  K+QAVA+RV AD +  + C F GYQDTLY HS RQFYR+C + GTID++FG+AA V Q C ++ R PL  Q   ITA  + DP E+TG  +Q C+I+   D  A     K+YLGRP
Sbjct:  239 RRLLNAPMSEVKPD----IVVAQDGSGQYKTINEALNFVPKKKNTTFVVHIKEGIYKEYVQVNRSMTHLVFIGDGPDKTVISGSKSYKDGITTYKTATVAIVGDHFIAKNIAFENTAGAIKHQAVAIRVLADESIFYNCKFDGYQDTLYAHSHRQFYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRP 470          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.981e-55
Identity = 116/241 (48.13%), Postives = 156/241 (64.73%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S +DR++L++S ++          V ADG+G   ++ +A+      S  R VI++  G Y+ENL IPS + N+ L+G GK  T+I  SRS   GW T++SATVA  GD F+ARD+T  N AGP   QAVALRV +D + ++RCS  GYQD+LY  S RQFYRE D+ GT+D+IFGN+AVV Q+CN+VSR     Q   +TAQ + DPN+NTGISI NC I         + S K+YLGRP
Sbjct:  210 VSSSDRKLLEASVEELRPHA----VVAADGSGTHMSVAEALASLEKGSG-RSVIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRP 435          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 7.812e-55
Identity = 108/238 (45.38%), Postives = 152/238 (63.87%), Query Frame = 2
Query:   11 TDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            T RR+LQ S+           TV  DG+G + TI +A++  P  + +  +I IK GVY+E ++IP   TN+ L+G G   T IT ++SV DG +TF + TV V+G  F+A+++  EN AGPEK QAVALRV+AD A ++ C   GYQDTLYVH++RQFYR+C + GT+D+IFGN   VLQ C ++ R P   Q  ++TAQ + +P +   I +QNC I    D ++ S   K+YLGRP
Sbjct:   45 TARRLLQISNAKPN------ATVALDGSGQYKTIKEALDAVPKKNTEPFIIFIKAGVYKEYIDIPKSMTNVVLIGEGPTKTKITGNKSVKDGPSTFHTTTVGVNGANFVAKNIGFENTAGPEKEQAVALRVSADKAIIYNCQIDGYQDTLYVHTYRQFYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRP 276          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME22_SOLLC8.346e-5748.13Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME16_ARATH8.346e-5748.13Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME36_ARATH1.424e-5652.51Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME60_ARATH1.859e-5649.79Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_SOLLC3.171e-5648.13Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME24_ARATH1.574e-5547.46Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH2.056e-5550.45Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME28_ARATH3.506e-5544.07Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME35_ARATH5.981e-5548.13Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_PETIN7.812e-5545.38Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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