CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.740e-54
Identity = 117/242 (48.35%), Postives = 157/242 (64.88%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNS-DDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +SR +RR+L S+   +    S  L V  D +G F +I  AINFA       R VI +K+GVY EN+++ +   NI L+G G+  TIIT  RSV  G+TT+ SAT    G RF+A+D+T  N AGP + QAVA+R ++D +  +R    G+QDTLY+HS RQF+REC + GTID+IFGNAAVV Q C I+ R PL GQ  +ITAQ + DP +NTGI+I +  I+A  DL     + K+YLGRP
Sbjct:  261 VSRHERRLLVSA---SLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRP 499          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.877e-54
Identity = 107/218 (49.08%), Postives = 143/218 (65.60%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +TV  DGTGD  T+ +A+   P  S    VI +K G Y EN+ +   K N+ + G GK  TII+ S++  DG  T+ +AT A+ G  F+ +D+ I N AG  K+QAVA R  +DF+  ++CSF G+QDTLY HS RQFYR+CDV GTID+IFG+AAVV Q C I+ R PL  QF  ITAQ K DPN+++G+SIQ C+I A  ++ A      +YLGRP
Sbjct:  281 VTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNVIA-----PTYLGRP 493          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.286e-53
Identity = 106/232 (45.69%), Postives = 146/232 (62.93%), Query Frame = 2
Query:   35 SDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            S  D        L V  DG+G+FTT+ +A+  AP N     VI IK+G+Y+E + I   KTN+ L+G G+D T+++   +  DG  TF SAT+AV    F+A+DL I N AGPEK QAVALR++ D   ++RC    YQDTLY +S RQFYR+C + GT+D+IFG AA V Q C I +R P  GQ  ++TAQ +++    +G S Q C+I A+ DL     +VK++LGRP R
Sbjct:   34 STPDQALKDKADLIVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWR 265          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 102/236 (43.22%), Postives = 151/236 (63.98%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR+L+S D      +   + V  DG+G + TI +A+      ++   +I +K+GVY EN+ +   K N+ ++G G+  TI++   +  DG  TF +AT AV G  F+ARD+   N AGP K+QAVAL V+AD +  ++C+   +QDT+Y H+ RQFYR+C + GT+D+IFGNAAVV Q C I+ R P+ GQ   ITAQ + DPN+NTGISI NC+I   ++L      ++++LGRP
Sbjct:  244 RRLLESGD----LKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNL----TDIQTFLGRP 471          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.247e-52
Identity = 101/236 (42.80%), Postives = 152/236 (64.41%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            R++LQ++   +  D    + V  DG+G + TI +A+ F P   +   V++IK G+Y+E +++    +++  +G G D TII+ +++  DG TT+R+ATVA+ G+ F+A+++  EN AG  K+QAVA+RV +D +  F C F GYQDTLY HS RQF+R+C + GTID++FG+AA V Q C ++ R PLP Q   ITA  + DP E+TG   Q C+I    D  A   + K+YLGRP
Sbjct:  240 RKLLQAAAAYS--DVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRP 473          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.629e-52
Identity = 108/236 (45.76%), Postives = 147/236 (62.29%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR+LQ+ +       +  +TV ADG+GD  T+ +A+   P       VI +K G Y EN+ +   K N+F+ G G+D TII+ S ++ DG  TF ++T A  G  F+ +D+ I N AGPEK+QAVA R ++D +  +RCSF GYQDTLY HS RQ+YR CDV GT+D+IFG   VV Q C+I  R PLP QF  ITA+   + N+NTGISI  C+I    ++ A      +YLGRP
Sbjct:  649 RRLLQAKN------LTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNVTAT-----TYLGRP 873          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 8.084e-52
Identity = 107/220 (48.64%), Postives = 144/220 (65.45%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + V  DGTG ++T+  AI  AP +S  R VI IK G+Y+E + I + K N+ L+G G+D TIIT + S  +   T+ +ATVA +G+ F+  D+   N AGP K  AVALRV+ D + ++RC   GYQD LY HS RQFYREC + GT+D+I GNA  V Q C IV+R P  GQ  VITAQ +   +  +G SIQNC+I  + DL  ++A+VK+YLGRP R
Sbjct:  189 VVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDL--DTATVKTYLGRPWR 406          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.379e-51
Identity = 106/220 (48.18%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + V  DGTG + T+  AI  AP +S  R +I IK G+Y+E + I + K N+ L+G G+DSTIIT + S  +   TF +AT A +G  F+  D+   N  GP K  AVALRV+ D + ++RC   GYQD LY H  RQFYREC + GT+D+I GNAA V Q C IV+R P  GQ   ITAQ ++  ++ +G SIQNC+I A+ DL  ++A+VK+YLGRP R
Sbjct:  216 VVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDL--DTATVKTYLGRPWR 433          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.379e-51
Identity = 104/241 (43.15%), Postives = 144/241 (59.75%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DRR+L++ D       +   TV  DG+GDFTTI DA+   P   + R +I +KQG+Y+E + +   K N+ ++G G   TI+T ++S      TF +AT    G+ F+A+ +   N AG E +QAVA+RV +D +    C F GYQDTLY ++ RQ+YR C + GTID+IFG+AA + Q CNI  R  LPGQ   +TAQ + D  + TG  + NC I A EDL       KSYLGRP
Sbjct:  282 VSNDDRRMLRAVDVKALKPNA---TVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRP 519          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.938e-51
Identity = 106/220 (48.18%), Postives = 142/220 (64.55%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWT-TFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASV-KSYLGRP 724
            + V  DG+G + TI +A+N  P  +    VI IKQGVY E +++    T++  +G G   T IT S +   G   T+ +ATVA++GD F A+++  EN AGPE +QAVALRV+AD A  + C   GYQDTLYVHS RQF+R+C V GT+D+IFG+  VVLQ CNIV R P+  Q  +ITAQ + D  E+TG+ +QNC I   E  Y    S+ K+YLGRP
Sbjct:  260 VVVAHDGSGQYKTINEALNAVPKANQKPFVIYIKQGVYNEKVDVTKKMTHVTFIGDGPTKTKITGSLNYYIGKVKTYLTATVAINGDNFTAKNIGFENTAGPEGHQAVALRVSADLAVFYNCQIDGYQDTLYVHSHRQFFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITG-EPAYIPVKSINKAYLGRP 478          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME33_ARATH1.740e-5448.35Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME1_ARATH3.877e-5449.08Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME56_ARATH4.286e-5345.69Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME46_ARATH1.247e-5243.22Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME21_ARATH1.247e-5242.80Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME26_ARATH1.629e-5245.76Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME30_ARATH8.084e-5248.64Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME42_ARATH1.379e-5148.18Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH1.379e-5143.15Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME58_ARATH8.938e-5148.18Probable pectinesterase/pectinesterase inhibitor 5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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