CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1010 contig Csv1_Contig1010:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.167e-50
Identity = 106/220 (48.18%), Postives = 143/220 (65.00%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + V  DGTG ++T+  AI  AP +S  R VI IK G+Y+E + I + K N+ L+G G+D TIIT + S  +   TF +ATVA +G+ F+  D+   N AGP K  AVALRV+ D + ++RC   GYQD LY HS RQFYREC + GT+D+I GNA  V Q C IV+R P  GQ  VITAQ +   +  +G +IQ C+I A+ DL  ++ +VK+YLGRP R
Sbjct:  216 VVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDL--DTTTVKTYLGRPWR 433          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 1.686e-49
Identity = 99/217 (45.62%), Postives = 137/217 (63.13%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWT-TFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DGTG F TITDA+N  P  +    +I+IK+G+Y+E + +     ++  +G G + T+IT S + G G   TF +AT+ + GD F A+++ IEN AGPE  QAVALRV+AD+A    C   G+QDTLYVHS RQFYR+C V GT+D+IFG+A  +LQ C IV R P  GQ  ++TAQ + +  E+TG+ +  C I          +  K+YLGRP
Sbjct:  260 VAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRP 476          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.201e-49
Identity = 102/241 (42.32%), Postives = 143/241 (59.34%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            LS  +RR+L++ D       +   TV  DG+G+FTTI  A+   P     R  I IK G+Y+E++ I   K N+ ++G G   TI+T ++S      TF +AT    G+ F+A+ +   N AGPE +QAVA+RV +D +    C F GYQDTLY ++ RQ+YR C + GT+D+IFG+AA + Q C+I  R  LPGQ   +TAQ + D  + TG  I NC++   EDL    A  KSYLGRP
Sbjct:  277 LSNKERRMLKAVDVKALKPNA---TVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRP 514          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 1.578e-47
Identity = 106/231 (45.89%), Postives = 145/231 (62.77%), Query Frame = 2
Query:   71 LTVDADGTGD--FTTITDAINFAPN-NSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGD-GWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIV-----SRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATE----DLYANSASVKSYLGRP 724
            +TV  +G  D  + T+ +A++ AP+ N   + VI I++GVYEE + +P  K N+  +G G   T+IT S +VG  G TTF SATV V GD F+ARDLTIEN AG + +QAVA R ++DF+ L  C F G QDTLY HS RQFY++C + G +D+IFGN+A V Q C+I+     S+L   G    ITA  + D +++TG    NCSI  TE    +  AN    K++LGRP
Sbjct:  289 VTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRP 519          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.691e-47
Identity = 102/228 (44.74%), Postives = 140/228 (61.40%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAP-NNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG-DGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIV----SRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATED----LYANSASVKSYLGRP 724
            +TV  DG   + T+ DA+N AP +N   + VI I +GVYEEN+ +P  K N+  +G G   T+IT S + G  G TT+ +ATV V GD F+ARDLT +N AGP+ +QAVA R ++DF+ +  C F G QDTLY H  RQFY+ C + G +D+IFGN+A V Q C I+       P  G+   +TAQ + DP+++TG    NC I  TE+      AN    K++LGRP
Sbjct:  241 VTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRP 468          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.515e-47
Identity = 102/237 (43.04%), Postives = 142/237 (59.92%), Query Frame = 2
Query:   17 RRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRS-VGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            RR+L     +N    + V  V  DG+G   TI  A+   P  +  + VI+IK+GVY+E +E+     ++  +G G   T+IT   + + D   T+R+A+VAV+GD F+A+D+  EN AG  ++QAVALRV+ADFA  F C  +GYQDTLYVH+ RQFYR C V GTID++FG+A  V Q C  V R P+  Q  ++TAQ + D  E TGI I N  I          A  +++LGRP
Sbjct:  376 RRLLARRPRNNGIKANVV--VAKDGSGKCKTIAQALAMVPMKNTKKFVIHIKEGVYKEKVEVTKKMLHVMFVGDGPTKTVITGDIAFLPDQVGTYRTASVAVNGDYFMAKDIGFENTAGAARHQAVALRVSADFAVFFNCHMNGYQDTLYVHTHRQFYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRP 610          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 187.193 bits (474), Expect = 7.830e-47
Identity = 104/223 (46.64%), Postives = 137/223 (61.43%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSV--GDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNE-----NTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+G F TI++A+   P+ +  R +I+IK G+Y E + IP  K NIF+ G G   TIIT  RSV    G TT  S TV V  + F+A+ +  +N AGP  +QAVALRVN D A +F C F GYQDTLYV++ RQFYR   V GT+D+IFG +A V+Q   I+ R   PGQ   +TA    D NE       GI + NC I+  ++L A+  ++KSYLGRP
Sbjct:  279 VAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTA----DGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRP 497          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.336e-46
Identity = 105/223 (47.09%), Postives = 136/223 (60.99%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG--DGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNE-----NTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+G F TI++A+   P  +  R +I IK GVY+E + IP    N+F+ G G   TIIT  RSVG   G TT  S TV V  + F+A+ +  +N AGP  +QAVA RVN D A +F C F GYQDTLYV++ RQFYR   V GT+D+IFG +A V+Q   I+ R   PGQ   +TA    D NE       GI + NC I+A ++L A+  +VKSYLGRP
Sbjct:  275 VAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTA----DGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRP 493          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 6.628e-46
Identity = 106/251 (42.23%), Postives = 146/251 (58.17%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQV---LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSV--GDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNE-----NTGISIQNCSILATEDLYANSASVKSYLGRP 724
            +S  DR+++  +   +    +++     V  DG+G F T+  A+N  P  +  R +I+IK G+Y E + IP  K NIF+ G G   T+I+ +RSV    G TT  S TV V  + F+A+ +  +N AGP  +QAVA+RVN D A +F C F GYQDTLYV++ RQFYR   V GT+D+IFG +A V+Q   IV R    GQF  +TA    D NE       GI +QNC I+  + L A    V+SYLGRP
Sbjct:  258 VSGADRKLMTKAGRGSNDGGARIRATFVVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTA----DGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRP 504          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.290e-45
Identity = 102/219 (46.58%), Postives = 132/219 (60.27%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG--DGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNE-NTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+G F TI++A+   P  +  R +I IK GVY+E + IP    N+F+ G G   TIIT  RSVG   G TT  S TV V  + F+A+ +  +N AGP   QAVA RVN D A +F C F GYQDTLYV++ RQFYR   V GT+D+I G +A V+Q   I+ R   PGQ   +TA  K        GI + NC I+A ++L A+  +VKSYLGRP
Sbjct:  262 VAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRP 480          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME19_ARATH1.167e-5048.18Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME23_ARATH1.686e-4945.62Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME45_ARATH2.201e-4942.32Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME64_ARATH1.578e-4745.89Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME51_ARATH2.691e-4744.74Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME43_ARATH3.515e-4743.04Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME37_ARATH7.830e-4746.64Probable pectinesterase/pectinesterase inhibitor V... [more]
PME_BRANA1.336e-4647.09Probable pectinesterase/pectinesterase inhibitor O... [more]
PME5_ARATH6.628e-4642.23Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME_BRACM3.290e-4546.58Pectinesterase/pectinesterase inhibitor (Fragment)... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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