CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.611e-45
Identity = 101/223 (45.29%), Postives = 133/223 (59.64%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG--DGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNE-----NTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+G F T+  A++  P N+  R +I IK G+Y E + IP  K NIF+ G G   T+I+ +RSV    G TT  SATV V  + F+A+ +  +N AGP  +QA A+RVN D A +F C F GYQDTLYV++ RQFYR C V GT+D+IFG +A V+Q   IV R    GQ+  +TA    D NE       GI +QNC I+    L     +V +YLGRP
Sbjct:  279 VAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTA----DGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRP 497          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.207e-41
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            V  DG+G F T+TDA+   P  +    VI++K GVY+E + +      + ++G G   T  T S +  DG  T+ +AT  V+G  F+A+D+  EN AG  K+QAVALRV AD A  + C   G+QDTLYV S RQFYR+C + GTID++FG    V Q C +V RLP  GQ  ++TA  ++  N  + +  Q+        L + +  V SYLGRP
Sbjct:  134 VAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRP 348          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.098e-40
Identity = 91/221 (41.18%), Postives = 122/221 (55.20%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + V  DG+GD+ T+ +A+  A  N                                GKD T+I    S   G +   +AT+ V+GD F+ARD+ I+N AGP  +QA+AL + +D + L+RCS SGYQDTLY  + RQFYRECD+YGTID+IFGNAA V Q+CNI  R P   + + VI A  + D  +NTG ++ +C I    DL        SYLGRP R
Sbjct:  230 VVVAKDGSGDYRTVMEAVTAAHGN--------------------------------GKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWR 418          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.214e-31
Identity = 80/233 (34.33%), Postives = 123/233 (52.79%), Query Frame = 2
Query:   62 SQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIIT------------RSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            ++++ V  DG+GD+ ++ DAI+  P  +  R VI +  G+Y + + +P  K  I   G   + T++T             SR +G G  TF   +V V G+ F+A ++T EN A     QAVA+RV AD  A + C F G+QDTLY+H  +Q+ ++C + G++D+IFGN+  +L+ C+I  +         ITAQ +    E+TG     C I        N  S   YLGRP
Sbjct:    4 TRMVRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTG--TFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCK-----SQGFITAQSRKSSQESTGYVFLRCVIT------GNGQSGYMYLGRP 223          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 76/188 (40.43%), Postives = 106/188 (56.38%), Query Frame = 2
Query:    2 LSRTDRRILQSSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIV 565
            LS  D++ L  +D+  +  +   + V  D TG++  +  AI  AP +S  R VI IK  +Y E + I + K+N+ L+  G+DSTIIT + S  +   TF +AT A +GD F+  D+   N   P K   V LRVN D + ++RC    YQD LY H  RQ YRE  +  T+D+I GNAA V Q C IV
Sbjct:   57 LSHVDKKDLYLNDETLK--KITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQIV 242          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.136e-29
Identity = 84/229 (36.68%), Postives = 120/229 (52.40%), Query Frame = 2
Query:   47 NEYDQSQVLTVDADGT-GDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIIT------RSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA-----GPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSA 697
            N+   S  LTV      GDFT I DAI+  P  +  RVVI +  GVY+E + IP  K  I + G G + T +          S G+   T+ SA+ AV+   F+A+++T  N       G    QAVALRV+AD AA F C   G QDTLY H  R +Y++C + G++D+IFGNA  + + C++ +   +  +   +TAQ +    E+TG S   C +  T  LY   A
Sbjct:   77 NKLFPSYTLTVHKKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHVHA---IADKLGAVTAQGRSSVLEDTGFSFVKCKVTGTGVLYLGRA 302          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29
Identity = 83/224 (37.05%), Postives = 119/224 (53.12%), Query Frame = 2
Query:   56 DQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIEN-----KAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLP--LPGQFTV---ITAQLKDDPNENTGISIQNCSILATEDLYANSA 697
            D +  L VD +G  +FTT+  A++   N S  R VI I  G+Y E + IP  K NI L G G D T I  + +      TF  ATV V G +F+A++++  N     K G    QAVA+R+  D +A   C F G QDTL+    R ++++C + G+ID+IFGNA  + Q C I+S      PG   V   +TA  +   +EN+G S  NC+I  T  ++   A
Sbjct:   86 DTTSYLCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHVWLGRA 309          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.772e-28
Identity = 74/213 (34.74%), Postives = 110/213 (51.64%), Query Frame = 2
Query:   47 NEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA-----GPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQAC--NIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSI 664
            ++Y  S VLTVD  G G+F+ +  AI+  P+ S  + +I +  G Y E + +   KTN+ + G G  +T I  + +      T  S +  V    F A +++ +N A     G    QAVALR+  D AA + C F G QDTL     R F++EC + G+ID+IFGN   + Q C  N +++    G    ITAQ +   +E +G S  NC I
Sbjct:   83 HQYKTSLVLTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI 295          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.368e-27
Identity = 76/229 (33.19%), Postives = 117/229 (51.09%), Query Frame = 2
Query:   47 NEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGK--DSTIITRSRSVGD------GWTTFRSATVAVSGDRFLARDLTIEN----KAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSA 697
            N  +  +V+ VD +G GD  T+  A++  P+++  RV I I  G+Y E + +P  K  I  +G       T+I+ S    D         T+R+A+V++  D F A  +T EN    +AG +  QAVALR+  D A  +R    G QDTL+  +   ++ +C + G +D+IFGNA  + Q C+I S      ++  I A  +D   E+TG S  NC I  T  +Y   A
Sbjct:   74 NATNVRRVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAK---RYGAIAAHHRDSETEDTGFSFVNCDISGTGQIYLGRA 299          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.535e-26
Identity = 72/222 (32.43%), Postives = 115/222 (51.80%), Query Frame = 2
Query:   65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIIT---RSRSVGDGWT---TFRSATVAVSGDRFLARDLTIENKA-----GPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSA 697
            +V+TV  +G   F ++ DA++  P N++  + I I  G Y E + +P+ K  I   G G+D T I    R+  +G       T+++A+V V  + F AR+++  N A     G + +QAVA R++ D A    C F G QDTL   + R +++EC + G+ID+IFGN   + + C + S   +  +F  I A  +  P E TG +   C +  T  LY   A
Sbjct:   59 KVITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCELHS---IASRFGSIAAHGRTCPEEKTGFAFVGCRVTGTGPLYVGRA 277          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME4_ARATH5.611e-4545.29Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME_MEDSA2.207e-4141.20Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME54_ARATH7.098e-4041.18Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME31_ARATH1.214e-3134.33Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME57_ARATH5.099e-3040.43Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]
PME53_ARATH1.136e-2936.68Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME8_ARATH1.483e-2937.05Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME15_ARATH4.772e-2834.74Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME62_ARATH2.368e-2733.19Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME68_ARATH1.535e-2632.43Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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