CF832365

Overview
NameCF832365
Unique NameCF832365
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length732
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1010 contig Csv1_Contig1010:1..732. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.938e-25
Identity = 76/228 (33.33%), Postives = 112/228 (49.12%), Query Frame = 2
Query:   62 SQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKA-----GPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            + VL V  +G G F  + DAI+ +  +S  + +I I  G+Y E   +   K N+ + G G   T I  + +      TF S +VAV G++F A +++ +N A     G    QAVAL+V  D AA + C F G QDTL     R F++ C + G+ID+IFGN   + + C + S +        ITA  KD   + TG    NC I         + S + +LGR  R
Sbjct:   39 TMVLKVSLNGCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHS-IAKENTIGCITANGKDTLKDRTGFVFVNCKI---------TGSARVWLGRAWR 256          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.450e-25
Identity = 67/215 (31.16%), Postives = 111/215 (51.63%), Query Frame = 2
Query:   71 LTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAG-----PEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNI-VSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSA 697
            + VD +G GD+T++  AI+  P  + + +++++++G+Y+E + IP  K  IF+ G GK  T+I  S+S  D      SAT  V  + F+A  ++I N A        + Q+VA  V AD  A + C+F    +TL+ +  R +Y EC + G+ID+IFG A  +   C I V        +  ITA  ++   E TG       +   +++Y   A
Sbjct:   46 IIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVD---NVASATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEIFVISDKRVKPYGSITAHHRESAEEKTGYVFIRGKVYGIDEVYLGRA 257          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.424e-25
Identity = 76/233 (32.62%), Postives = 119/233 (51.07%), Query Frame = 2
Query:   32 SSDDDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVV--INIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRP 724
            SS    ++  + ++ VD  G GDF+ I +AI   P N ++  +  I +K G+Y E + IP+ K  I L G    +T +  S    DG     S T+ +    F+ R LTI+NK G    +AVALRV AD AA + C  + YQDTL   +   +++ C + G  D+I G+A+ + + C++ S  P  G    ITAQ++    E +G +   C +         + S  ++LGRP
Sbjct:   38 SSPSSIDFSTAILIRVDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGS---ITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRP 253          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.877e-24
Identity = 72/208 (34.62%), Postives = 109/208 (52.40%), Query Frame = 2
Query:   65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKY----QAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSILAT 673
            Q++TV+  G  +F T+ +AI   P  + +RV+I +  GVY E + I   +  I LLG     T++T   +    + T  SAT+ V  + F A  LTI+N A   K     QA+A+R+NAD AA + C F G+QDTL       F+++C + GT D+IFG  A    +  + ++L   G    VITAQ +    E  G +  +C +  T
Sbjct:   65 QIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQ-YGTVESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGA----SLYLNTQLHAVGDGLRVITAQGRQSATEQNGYTFVHCKVTGT 267          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.756e-22
Identity = 72/233 (30.90%), Postives = 110/233 (47.21%), Query Frame = 2
Query:   65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAG-PEKYQ--------AVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQAC--NIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            Q + VD  G G+FTTI  AI+  P N+     IN+K G+Y E ++IP  K  I L+G GK  T +       D ++  +S T +   D  + + +T  N    P K +        AVA  +  D +A +   F+G QDTL+    R ++  C + G +D+IFG    + Q+C   ++     PG    ITAQ + +P +  G    NC +  T           ++LGRP R
Sbjct:   32 QQVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRLTRV----EWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCLVYGTG---------MAFLGRPWR 251          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME10_ARATH (Putative pectinesterase 10 OS=Arabidopsis thaliana GN=PME10 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.111e-22
Identity = 68/220 (30.91%), Postives = 108/220 (49.09%), Query Frame = 2
Query:   41 DDNEYDQSQVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENK------AGPEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRL---PLPGQFTVITAQLKDDPNENTGISIQNCSILAT 673
            D +    ++ + V+ +    F T+  AI+  P  + D + I I  G+Y E + IP  K  I++ GGG + TII    + GD   T  SAT        +   +T +NK      + P K  AVA  +  D  A+   SF G+QDTLY    R +Y+ C + G ID+IFG A  + + C +  R+   P    +  ITAQ +D P +  G   ++C+++ +
Sbjct:   31 DGSSSQIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQGGGIEKTII----AYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTK-PAVAAMMLGDKYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFEGCTLKLRVGIYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGS 245          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.650e-21
Identity = 67/205 (32.68%), Postives = 103/205 (50.24%), Query Frame = 2
Query:   65 QVLTVDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAGPEKY----QAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQ-FTVITAQLKDDPNENTGISIQNCSI 664
            +V+ V+ +G GDF TI  AI   P  + +RV+I +  G+Y E + +   +  + LLG     T +T + +    + T  SAT+ V    FLA +L I N +   K     QA+A+R+N D AA + C F G+QDTL       F++ C + GT D+IFG  A    +  + ++L   G    VI A  +    E  G S  +C +
Sbjct:   65 RVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAK-YGTVESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGA----SLYLTTQLHAVGDGLRVIAAHNRQSTTEQNGYSFVHCKV 264          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.380e-21
Identity = 80/234 (34.19%), Postives = 113/234 (48.29%), Query Frame = 2
Query:  101 FTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG----DG--WTTFRSATVAVSGDRFLARDLTIEN--------------KAGPEKYQAVALRV--NADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQL---KDDPNENTGISIQNCSILATEDLYANSASVKSY-LGRP 724
            F TI DAI  AP  S   V++ IK GVY E L I   + N+ L G  ++  +I  + + G    DG  W T  S+T+ +S   F A+ LTI N               +  +  QAVAL V  + D A     S  GYQDTLYV   R F+ +C + GT+D+IFG+   +   C++VSR     +   ++  L     + N+  G+ I N  ++   D    S   KSY LGRP
Sbjct:   42 FKTIADAIASAPAGSTPFVIL-IKNGVYNERLTIT--RNNLLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD----SVPAKSYGLGRP 268          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.638e-21
Identity = 80/234 (34.19%), Postives = 113/234 (48.29%), Query Frame = 2
Query:  101 FTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVG----DG--WTTFRSATVAVSGDRFLARDLTIEN--------------KAGPEKYQAVALRV--NADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQACNIVSRLPLPGQFTVITAQL---KDDPNENTGISIQNCSILATEDLYANSASVKSY-LGRP 724
            F TI DAI  AP  S   V++ IK GVY E L I   + N+ L G  ++  +I  + + G    DG  W T  S+T+ +S   F A+ LTI N               +  +  QAVAL V  + D A     S  GYQDTLYV   R F+ +C + GT+D+IFG+   +   C++VSR     +   ++  L     + N+  G+ I N  ++   D    S   KSY LGRP
Sbjct:   42 FKTIADAIASAPAGSTPFVIL-IKNGVYNERLTIT--RNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDLVSRYRADVKSGNVSGYLTAPSTNINQKYGLVITNSRVIRESD----SVPAKSYGLGRP 268          
BLAST of CF832365 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.259e-20
Identity = 69/229 (30.13%), Postives = 104/229 (45.41%), Query Frame = 2
Query:   77 VDADGTGDFTTITDAINFAPNNSDDRVVINIKQGVYEENLEIPSYKTNIFLLGGGKDSTIITRSRSVGDGWTTFRSATVAVSGDRFLARDLTIENKAG---------PEKYQAVALRVNADFAALFRCSFSGYQDTLYVHSFRQFYRECDVYGTIDYIFGNAAVVLQAC--NIVSRLPLPGQFTVITAQLKDDPNENTGISIQNCSILATEDLYANSASVKSYLGRPLR 730
            VD  G G+FTTI  AI+  P N+     IN+K G+Y E + IP  K  I ++G GK ST +       D  +  +S T A   D  + + +T  N              +  AVA  +  D +A +   F+G QDTL+    R ++  C + G +D+I G+   + Q+C   ++     PG    ITAQ + + N+  G    NC +             K+YLGR  R
Sbjct:   31 VDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRV----EWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCLV---------HGFGKAYLGRAWR 246          
The following BLAST results are available for this feature:
BLAST of CF832365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
PME14_ARATH4.938e-2533.33Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME67_ARATH6.450e-2531.16Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]
PME11_ARATH8.424e-2532.62Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]
PME50_ARATH1.877e-2434.62Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME29_ARATH1.756e-2230.90Probable pectinesterase 29 OS=Arabidopsis thaliana... [more]
PME10_ARATH5.111e-2230.91Putative pectinesterase 10 OS=Arabidopsis thaliana... [more]
PME49_ARATH5.650e-2132.68Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PMEA_ERWCH7.380e-2134.19Pectinesterase A OS=Erwinia chrysanthemi GN=pemA P... [more]
PMEA_DICD39.638e-2134.19Pectinesterase A OS=Dickeya dadantii (strain 3937)... [more]
PME55_ARATH1.259e-2030.13Probable pectinesterase 55 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832365 ID=CF832365; Name=CF832365; organism=Citrus sinensis; type=EST; length=732bp
GTTGTCAAGAACAGATCGCCGGATTCTGCAGAGCTCCGATGACGATAATG
AGTATGACCAGAGTCAAGTACTGACTGTGGATGCCGATGGAACAGGAGAT
TTCACTACCATCACTGATGCGATAAATTTTGCTCCCAATAACAGCGATGA
TAGAGTAGTCATCAATATCAAACAAGGGGTTTATGAGGAGAATTTGGAAA
TTCCAAGCTATAAGACCAACATTTTTCTGCTTGGAGGCGGTAAAGATTCA
ACTATCATCACCAGAAGCAGAAGTGTGGGCGATGGCTGGACCACTTTCAG
ATCTGCAACAGTAGCTGTGTCCGGAGACCGGTTTCTGGCACGGGACCTAA
CAATTGAGAACAAGGCAGGGCCAGAGAAGTACCAAGCGGTTGCCTTAAGA
GTGAATGCAGATTTTGCAGCCTTGTTCAGATGCAGCTTCTCTGGTTACCA
AGATACGTTATATGTACACTCATTTCGTCAGTTTTATCGAGAGTGCGACG
TATACGGAACCATAGACTACATATTTGGTAACGCTGCAGTGGTTCTCCAG
GCATGTAACATCGTATCTAGACTGCCATTGCCAGGGCAATTCACAGTCAT
CACAGCACAATTAAAAGACGACCCGAATGAAAACACTGGAATCTCAATCC
AAAATTGTTCAATTTTGGCTACTGAAGATCTGTATGCAAATTCTGCAAGT
GTTAAAAGTTACCTAGGCAGGCCCTTGAGGAT
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