CF832366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.667e-29 Identity = 65/76 (85.53%), Postives = 69/76 (90.79%), Query Frame = -2 Query: 387 MQIFVKTLTGKTITLEVESSGTIVNVKAKIQDKEGIPPDQQRLIFPGKQLEDGRPLADFNIQKESTLPLVLRLRGG 614 MQIFVKTLTGKTITL+VE S +I NVK KIQDKEGIPPDQQRLIF GKQLEDGR L+D+NIQKESTL LVLRLRGG Sbjct: 1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.477e-28 Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = -2 Query: 387 MQIFVKTLTGKTITLEVESSGTIVNVKAKIQDKEGIPPDQQRLIFPGKQLEDGRPLADFNIQKESTLPLVLRLRGG 614 MQIFVKTLTG TI LEVE S TI NVKAKIQDKEGIPPDQQRLIF KQLE+GR L+D+NIQKESTL LVLRLRGG Sbjct: 1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: RS27A_SOLTU (40S ribosomal protein S27a OS=Solanum tuberosum GN=UBI3 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.224e-26 Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = -2 Query: 147 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFSRHYCGKCGLPYVYQKAGGD 317 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHF RHYCGKCGL YVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: RS27A_SOLLC (40S ribosomal protein S27a OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.224e-26 Identity = 53/57 (92.98%), Postives = 54/57 (94.74%), Query Frame = -2 Query: 147 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFSRHYCGKCGLPYVYQKAGGD 317 LAVLQFYKVDD+GKVQRLRKECPNAECGAGTFMANHF RHYCGKCGL YVY KAGGD Sbjct: 24 LAVLQFYKVDDTGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 80
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 56/76 (73.68%), Postives = 63/76 (82.89%), Query Frame = -2 Query: 387 MQIFVKTLTGKTITLEVESSGTIVNVKAKIQDKEGIPPDQQRLIFPGKQLEDGRPLADFNIQKESTLPLVLRLRGG 614 MQIFVKTLTGKTIT+E E T+ VK KI DKEG+P DQQRLI+ GKQLED + LAD+NIQKESTL +VLRLRGG Sbjct: 1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 54/76 (71.05%), Postives = 64/76 (84.21%), Query Frame = -2 Query: 387 MQIFVKTLTGKTITLEVESSGTIVNVKAKIQDKEGIPPDQQRLIFPGKQLEDGRPLADFNIQKESTLPLVLRLRGG 614 MQIF+KTLTGKTIT E E + T+ ++K KI DKEG+P DQQRLIF GKQLED + +AD+NIQKESTL +VLRLRGG Sbjct: 1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: RS27A_LUPAL (40S ribosomal protein S27a OS=Lupinus albus PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.552e-24 Identity = 50/54 (92.59%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 156 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFSRHYCGKCGLPYVYQKA 317 LAVLQFYKVDDSGKVQRLRKECPN ECGAGTFMANHF RHYCGKCG YVYQKA Sbjct: 24 LAVLQFYKVDDSGKVQRLRKECPNTECGAGTFMANHFDRHYCGKCGKTYVYQKA 77
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: R27AB_ARATH (40S ribosomal protein S27a-2 OS=Arabidopsis thaliana GN=UBQ6 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.654e-23 Identity = 49/55 (89.09%), Postives = 50/55 (90.91%), Query Frame = -2 Query: 153 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFSRHYCGKCGLPYVYQKAG 317 LAVLQFYKVD SGKVQRLRKECPNA CGAGTFMA+HF RHYCGKCGL YVYQK G Sbjct: 24 LAVLQFYKVDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: R27AC_ARATH (40S ribosomal protein S27a-3 OS=Arabidopsis thaliana GN=UBQ5 PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.161e-23 Identity = 48/55 (87.27%), Postives = 50/55 (90.91%), Query Frame = -2 Query: 153 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFSRHYCGKCGLPYVYQKAG 317 LAVLQFYK+D SGKVQRLRKECPNA CGAGTFMA+HF RHYCGKCGL YVYQK G Sbjct: 24 LAVLQFYKIDGSGKVQRLRKECPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 78
BLAST of CF832366 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.072e-22 Identity = 55/63 (87.30%), Postives = 57/63 (90.48%), Query Frame = -2 Query: 393 TITLEVESSGTIVNVKAKIQDKEGIPPDQQRLIFPGKQLEDGRPLADFNIQKESTLPLVLRLR 581 TITLEVE S TI NVKAKIQDKEGIPPDQQRLIF GKQLEDGR L+D+NIQKESTL LVLRLR Sbjct: 1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63 The following BLAST results are available for this feature:
BLAST of CF832366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832366 ID=CF832366; Name=CF832366; organism=Citrus sinensis; type=EST; length=645bpback to top |