CF832367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_SCHPO (40S ribosomal protein S27a OS=Schizosaccharomyces pombe GN=ubi3 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 473 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_CAEBR (40S ribosomal protein S27a OS=Caenorhabditis briggsae GN=ubl-1 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.117e-13 Identity = 32/54 (59.26%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 491 LAVL++YKVD++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKVDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_CAEEL (40S ribosomal protein S27a OS=Caenorhabditis elegans GN=ubl-1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.377e-13 Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 491 LAVL++YK+D++GK+ RLRKEC CG G FMA H +RHYCG+C T V A Sbjct: 24 LAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANRHYCGRCHDTLVVDTA 77
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS37_YEAST (40S ribosomal protein S31 OS=Saccharomyces cerevisiae GN=UBI3 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.198e-12 Identity = 32/49 (65.31%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTY 476 LAVL +YKVD GKV +LR+EC N CGAG F+ANH DR YCGKC Y Sbjct: 24 LAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 72
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.765e-12 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 ++E +DTI VK ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 16 DIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 ++E +DTI +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 16 DIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 ++E +DTI +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 16 DIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 32/55 (58.18%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 ++E +DTI +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ S LHLV Sbjct: 16 DIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_DICDI (40S ribosomal protein S27a OS=Dictyostelium discoideum GN=ubqC PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.014e-11 Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYV 479 LAVL++YK D++GK++R+ +ECP CGAG FMA H +R YCGKC T V Sbjct: 25 LAVLKYYKFDENGKIKRVLRECPAETCGAGVFMAQHANRQYCGKCHSTLV 74
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 ++E +D + +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q S LHLV Sbjct: 16 DIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLV 70 The following BLAST results are available for this feature:
BLAST of CF832367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832367 ID=CF832367; Name=CF832367; organism=Citrus sinensis; type=EST; length=618bpback to top |