CF832367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_ARATH (Ubiquitin OS=Arabidopsis thaliana GN=UBQ1 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 53/55 (96.36%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_ORYSJ (40S ribosomal protein S27a OS=Oryza sativa subsp. japonica GN=UBQ6 PE=3 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 50/56 (89.29%), Postives = 52/56 (92.86%), Query Frame = 3 Query: 330 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 491 LAVLQFYKVDD+ GKV RLRKECPN +CGAGTFMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNNDCGAGTFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_MAIZE (40S ribosomal protein S27a OS=Zea mays GN=UBF9 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.852e-22 Identity = 50/56 (89.29%), Postives = 51/56 (91.07%), Query Frame = 3 Query: 330 LAVLQFYKVDDS-GKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVY-QKA 491 LAVLQFYKVDD+ GKV RLRKECPN ECGAG FMANHFDRHYCGKCGLTYVY QKA Sbjct: 24 LAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA 79
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_COPCO (Ubiquitin OS=Coprinus congregatus PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21 Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV Sbjct: 16 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_ACECL (Ubiquitin OS=Acetabularia cliftonii PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.081e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDT+ NVK+KIQDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTVENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_ACACA (Ubiquitin OS=Acanthamoeba castellanii PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.412e-21 Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVK KIQDKEGIPPDQQRLIFAGKQL DGRTLADYNIQKESTLHLV Sbjct: 16 EVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV Sbjct: 16 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_CAEEL (Ubiquitin OS=Caenorhabditis elegans GN=ubq-1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV Sbjct: 16 EVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: R27AA_ARATH (40S ribosomal protein S27a-1 OS=Arabidopsis thaliana GN=UBQ15 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.844e-21 Identity = 44/54 (81.48%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 491 LAVLQFYKVD SGKVQRL+KECP+ CG GTFMA+HFDRHYCGKCG TYV++KA Sbjct: 24 LAVLQFYKVDGSGKVQRLKKECPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKA 77
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIQ_YEAST (Ubiquitin OS=Saccharomyces cerevisiae GN=UBI1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.408e-21 Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 EVESSDTI NVK+KIQDKEGIPPDQQRLIFAGKQL DGRTL+DYNIQKESTLHLV Sbjct: 16 EVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70 The following BLAST results are available for this feature:
BLAST of CF832367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832367 ID=CF832367; Name=CF832367; organism=Citrus sinensis; type=EST; length=618bpback to top |