CF832367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_MOUSE (40S ribosomal protein S27a OS=Mus musculus GN=Rps27a PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.255e-18 Identity = 37/53 (69.81%), Postives = 46/53 (86.79%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 488 LAVL++YKVD++GK+ RLR+ECP+ ECGAG FM +HFDRHYCGKC LTY + K Sbjct: 24 LAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCFNK 76
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_DROME (40S ribosomal protein S27a OS=Drosophila melanogaster GN=RpS27A PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.599e-17 Identity = 36/53 (67.92%), Postives = 44/53 (83.02%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 488 LAVL++YKVD++GK+ RLR+ECP CGAG FMA H DRHYCGKC LT+V+ K Sbjct: 24 LAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVFSK 76
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_NEUCR (40S ribosomal protein S27a OS=Neurospora crassa GN=ubi-3 PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 8.864e-16 Identity = 35/54 (64.81%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKA 491 LAVL++YKVD GK++RLR+ECPN CGAG FMA DR YCG+C LTYV++K+ Sbjct: 24 LAVLKYYKVDSDGKIERLRRECPNETCGAGVFMAAMQDRQYCGRCHLTYVFEKS 77
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.512e-15 Identity = 40/55 (72.73%), Postives = 45/55 (81.82%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 E E DT+ VK KI DKEG+P DQQRLI+AGKQL D +TLADYNIQKESTLH+V Sbjct: 16 ETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.579e-15 Identity = 38/55 (69.09%), Postives = 47/55 (85.45%), Query Frame = 3 Query: 78 EVESSDTIYNVKAKIQDKEGIPPDQQRLIFAGKQL*DGRTLADYNIQKESTLHLV 242 E E ++T+ ++K KI DKEG+P DQQRLIFAGKQL D +T+ADYNIQKESTLH+V Sbjct: 16 ETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMV 70
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_KLULA (40S ribosomal protein S27a OS=Kluyveromyces lactis GN=ubi3 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.724e-14 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 488 LAVL +YKVDD GKV +LRKECPN CG G F+ANH DR YCGKC T+ QK Sbjct: 24 LAVLNYYKVDDEGKVAKLRKECPN--CGPGIFLANHGDRFYCGKCHSTFATQK 74
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_PLUXY (40S ribosomal protein S27a OS=Plutella xylostella PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.296e-14 Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 485 LAVL+FYKVD++GK+ RLR+EC + +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTSEQCGAGVFMAVMEDRHYCGKCHRTMVFK 75
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_SPOFR (40S ribosomal protein S27a OS=Spodoptera frugiperda PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 485 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27A_MANSE (40S ribosomal protein S27a OS=Manduca sexta PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.084e-13 Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQ 485 LAVL+FYKVD++GK+ RLR+EC +CGAG FMA DRHYCGKC T V++ Sbjct: 24 LAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDRHYCGKCHSTMVFK 75
BLAST of CF832367 vs. ExPASy Swiss-Prot
Match: RS27B_SCHPO (40S ribosomal protein S27b OS=Schizosaccharomyces pombe GN=ubi5 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.152e-13 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = 3 Query: 330 LAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLT 473 LAVL++YKV+D G V+RLR+ECPN CGA TFMANH DR YCG+C LT Sbjct: 24 LAVLKYYKVEDDGSVKRLRRECPN--CGASTFMANHKDRLYCGRCHLT 69 The following BLAST results are available for this feature:
BLAST of CF832367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 112
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832367 ID=CF832367; Name=CF832367; organism=Citrus sinensis; type=EST; length=618bpback to top |