CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEA6 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=sucC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.472e-47 Identity = 90/142 (63.38%), Postives = 111/142 (78.17%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AAK +LNY+ LDG IGCMVNGAGLAM TMDI+ LHGG+PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V + +PVVVRLEGTN + G +L SG+ +I A L D Sbjct: 235 PSQEDAREAQAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGSPANFLDVGGGATKERVAEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTIPVVVRLEGTNAELGRDVLANSGLDIIAASSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ENT38 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Enterobacter sp. (strain 638) GN=sucC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.472e-47 Identity = 90/141 (63.83%), Postives = 114/141 (80.85%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 +QEDPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+KLHGG PANFLDVGG A++ +V EAFKI+ SD+KV A+LVNIFGGI++CD+IA GI+ A ++V + VPVVVRLEG N + G + L +SG+ +I A+ L D Sbjct: 236 SQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVEEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BACP2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bacillus pumilus (strain SAFR-032) GN=sucC PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 2.472e-47 Identity = 92/140 (65.71%), Postives = 113/140 (80.71%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +EDP+E+ A+K DL+YI LDG IGCMVNGAGLAM+TMDIIK +GG PANFLDVGG A+ +V EAFKI+ SD+ V I VNIFGGIMKCDVIA G+V A KQV L +P+VVRLEGTNV+ G +IL +SG+ + +AE + D Sbjct: 237 EEDPKEIEASKYDLSYISLDGNIGCMVNGAGLAMSTMDIIKHYGGDPANFLDVGGGATAEKVTEAFKIILSDQNVKGIFVNIFGGIMKCDVIAEGVVEATKQVGLTLPLVVRLEGTNVELGKKILSDSGLNITSAESMAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_SHEHH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella halifaxensis (strain HAW-EB4) GN=sucC PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.228e-47 Identity = 90/142 (63.38%), Postives = 112/142 (78.87%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+D RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A K+V ++VPVVVRLEGTN + G +L SG+ +I AE L D Sbjct: 235 PSQDDAREAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVEVPVVVRLEGTNANLGRDVLASSGLDIIAAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_MARMS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Marinomonas sp. (strain MWYL1) GN=sucC PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.228e-47 Identity = 90/142 (63.38%), Postives = 111/142 (78.17%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AAK +LNY+ LDG +GCMVNGAGLAM TMDI+ LHGG PANFLDVGG A++ +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A +QV + VPVVVRLEGTN ++G +L SG+ +I A L D Sbjct: 235 PSQEDEREAHAAKWELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVAEAFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVEQVGVNVPVVVRLEGTNAEKGREVLANSGLDIIAATSLKD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_MARAV (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=sucC PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.216e-47 Identity = 92/142 (64.79%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+QED RE AAK +LNY+ L+G IGCMVNGAGLAM TMDIIKL GG PANFLDVGG A++ +V EAFKI+ SD+ V A+LVNIFGGI++CD+IA GI+ A K+V +KVPVVVRLEG N + G ++L ESG+ +I A L D Sbjct: 235 PSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVGGGATKERVSEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGTKVLAESGLNIIAATSLAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_ENTS8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sucC PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.216e-47 Identity = 90/141 (63.83%), Postives = 113/141 (80.14%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 +QEDPRE AA+ +LNY+ LDG IGCMVNGAGLAM TMDI+KLHGG PANFLDVGG A++ +V EAFKI+ SD+KV A+LVNIFGGI++CD+IA GI+ A +V + VPVVVRLEG N + G + L +SG+ +I A+ L D Sbjct: 236 SQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=sucC PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.507e-47 Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ DLNY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V AFK++ S KV AI VNIFGGI++CD+IA GI+ A K+V +KVPV+VRLEGTNVD G ++L SG+ +I A+D++D Sbjct: 236 TQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLEGTNVDAGKQLLATSGLAIIPADDIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa (strain M12) GN=sucC PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.507e-47 Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ DLNY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V AFK++ S KV AI VNIFGGI++CD+IA GI+ A K+V +KVPV+VRLEGTNVD G ++L SG+ +I A+D++D Sbjct: 236 TQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLEGTNVDAGKQLLATSGLAIIPADDIND 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_XYLFA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella fastidiosa GN=sucC PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.507e-47 Identity = 90/141 (63.83%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED EV A++ DLNY+ +DG IGCMVNGAGLAMATMD+IKL+GG PANFLDVGG A++ +V AFK++ S KV AI VNIFGGI++CD+IA GI+ A K+V +KVPV+VRLEGTNVD G ++L SG+ +I A+D++D Sbjct: 236 TQEDETEVLASENDLNYVTMDGNIGCMVNGAGLAMATMDVIKLNGGEPANFLDVGGGATKERVTTAFKLILSSNKVKAIFVNIFGGIVRCDMIAEGIIAAVKEVGVKVPVIVRLEGTNVDAGKQLLATSGLAIIPADDIND 376 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |