CF832371
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_THISH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=sucC PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50 Identity = 96/141 (68.09%), Postives = 115/141 (81.56%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 TQED RE A + +LNY+ LDG IGCMVNGAGLAMATMD+IKLHGG PANFLDVGG + +V EAFK++ SDE V A+ VNIFGGI++CD+IA GI+NA K+V + VPVVVRLEGTNVDQG ++L ESG+ +ITAE L D Sbjct: 236 TQEDAREARAREHELNYVRLDGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVGGGTTAARVAEAFKLILSDEAVKAVFVNIFGGIVRCDLIAEGIINAVKEVHVTVPVVVRLEGTNVDQGKQMLAESGLNIITAESLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BREBN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=sucC PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.950e-50 Identity = 96/140 (68.57%), Postives = 115/140 (82.14%), Query Frame = -2 Query: 268 QEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 687 +ED +E+ A+K DL+YI LDG IGCMVNGAGLAMATMDI+K +GG PANFLDVGG A+E +V EAFKI+ DEKV I VNIFGGIMKCDVIA+G+VNAAKQ+ L P+VVRLEGTNVD G +IL ESG+ ++ AE + D Sbjct: 237 EEDEKEIEASKFDLSYIALDGNIGCMVNGAGLAMATMDIVKFYGGDPANFLDVGGGATEEKVTEAFKIILRDEKVKGIFVNIFGGIMKCDVIANGVVNAAKQIKLDKPLVVRLEGTNVDLGKKILNESGLNIVAAESMAD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_RHIME (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Rhizobium meliloti GN=sucC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.077e-50 Identity = 96/141 (68.09%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V +AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 TEEDDKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTQAFKIITADPAVKGILVNIFGGIMKCDVIAEGVLAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BRASO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium sp. (strain ORS278) GN=sucC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.077e-50 Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIMKCDVIA G+V A K+V LKVP+VVRLEGTNVD G +I+ ESG+ ++ A++LDD Sbjct: 246 TEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BRASB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=sucC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.077e-50 Identity = 97/141 (68.79%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 T+ED +E+ A+K DLNY+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIMKCDVIA G+V A K+V LKVP+VVRLEGTNVD G +I+ ESG+ ++ A++LDD Sbjct: 246 TEEDAKEIEASKYDLNYVALDGTIGCMVNGAGLAMATMDIIKLYGMEPANFLDVGGGASKEKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKEVGLKVPLVVRLEGTNVDLGKKIISESGLNVLPADNLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_BARBK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=sucC PE=3 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 9.077e-50 Identity = 96/141 (68.09%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++EDP+E+ A+K DL YI LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIM+CDVIA G++ A K+V LKVP+VVRLEGTNV+QG I+ +SG+ +I+A DLDD Sbjct: 246 SEEDPKEIEASKHDLAYIALDGMIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTHAFKIITADPNVKGILVNIFGGIMRCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVEQGKAIINDSGLNVISANDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_NITHX (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=sucC PE=3 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.022e-49 Identity = 94/141 (66.67%), Postives = 119/141 (84.40%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++ED +E+ A++ DL+Y+ LDG+IGCMVNGAGLAMATMDIIKL+G +PANFLDVGG A++ +V AFKI+T+D V ILVNIFGGIMKCDVIA G+V A KQV L VP+VVRLEGTNVD G +I++ESG+ ++ A+DLDD Sbjct: 246 SEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMSPANFLDVGGGATKDKVAAAFKIITADPNVKGILVNIFGGIMKCDVIAEGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_PSEU5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas stutzeri (strain A1501) GN=sucC PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.641e-49 Identity = 93/142 (65.49%), Postives = 113/142 (79.58%), Query Frame = -2 Query: 268 PTQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 693 P+Q+DPRE AAK +LNY+ LDG IGCMVNGAGLAM TMDI+ LHGG PANFLDVGG A+E +V EAFKI+ SD V A+LVNIFGGI++CD+IA GI+ A ++V +KVPVVVRLEG N D G ++L ESG+ +I A L D Sbjct: 235 PSQDDPREAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVNLHGGAPANFLDVGGGATEERVTEAFKIILSDSNVAAVLVNIFGGIVRCDMIAEGIIGAVREVGVKVPVVVRLEGNNADLGAKMLSESGLNIIGANSLTD 376
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_OCHA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=sucC PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.449e-49 Identity = 95/141 (67.38%), Postives = 117/141 (82.98%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++ED +E+ A+K DL Y+ LDG IGCMVNGAGLAMATMDIIKL+G PANFLDVGG AS+ +V AFKI+T+D V ILVNIFGGIMKCDVIA G++ A K+V LKVP+VVRLEGTNV+ G +I+ ESG+ +I+A+DLDD Sbjct: 246 SEEDEKEIEASKYDLAYVALDGNIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPAVQGILVNIFGGIMKCDVIAEGVIAAVKEVGLKVPLVVRLEGTNVELGKKIINESGLNVISADDLDD 386
BLAST of CF832371 vs. ExPASy Swiss-Prot
Match: SUCC_NITWN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=sucC PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.449e-49 Identity = 93/141 (65.96%), Postives = 118/141 (83.69%), Query Frame = -2 Query: 268 TQEDPREVAAAKADLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEGQVVEAFKILTSDEKVIAILVNIFGGIMKCDVIASGIVNAAKQVALKVPVVVRLEGTNVDQG*RILKESGMTLITAEDLDD 690 ++ED +E+ A++ DL+Y+ LDG+IGCMVNGAGLAMATMDIIKL+G PANFLDVGG A++ +V AFKI+T+D V IL+NIFGGIMKCDVIA G+V A KQV L VP+VVRLEGTNVD G +I++ESG+ ++ A+DLDD Sbjct: 246 SEEDAKEIEASRFDLSYVALDGQIGCMVNGAGLAMATMDIIKLYGMAPANFLDVGGGATKDKVAAAFKIITADPNVKGILINIFGGIMKCDVIADGVVAAVKQVGLNVPLVVRLEGTNVDAGKKIIRESGLNVLPADDLDD 386 The following BLAST results are available for this feature:
BLAST of CF832371 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832371 ID=CF832371; Name=CF832371; organism=Citrus sinensis; type=EST; length=694bpback to top |