CF832373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: L2AM_DROSI (Alpha-methyldopa hypersensitive protein (Fragment) OS=Drosophila simulans GN=amd PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.399e-27 Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 233 SSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFS--GNGGGVIQGTTCEAILCTLTAARDRVLNKIGR--------ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 +S S +GEML+SGF ++GF+WI SPA TELE +VMDWL + LK P F + G GGGVIQG+ EA+L + AAR++ + E +L+ Y SDQ++ ++KA + + ++ A + L D+L I DV G IP+ AT+GTTG A D ++ Sbjct: 1 TSTSYPSIVGEMLASGFGVIGFSWICSPACTELEVVVMDWLAKFLKPPAHFQHASDGPGGGVIQGSASEAVLVAVLAAREQAVASYRESHPELSESEVRGRLVAYSSDQSNSCIEKAGVLAAMPIRLLPA-----GEDFVLRGDTLRGAIEEDVAAGRIPVICVATLGTTGTCAYDDIE 174
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_RAT (Glutamate decarboxylase 1 OS=Rattus norvegicus GN=Gad1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L A+I + G +PL++ AT GTT A DP++ Sbjct: 159 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIIGWSNK-----DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLEAKILDAKQKGFVPLYVNATAGTTVYGAFDPIQ 356
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_FELCA (Glutamate decarboxylase 1 OS=Felis catus GN=GAD1 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11 Identity = 53/206 (25.73%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L A+I + G +PL++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKFFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLEAKILEAKQKGYVPLYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_CANFA (Glutamate decarboxylase 1 OS=Canis familiaris GN=GAD1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.435e-11 Identity = 53/206 (25.73%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L A+I + G +PL++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKFFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLEAKILEAKQKGYVPLYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_PIG (Glutamate decarboxylase 1 OS=Sus scrofa GN=GAD1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.180e-11 Identity = 53/206 (25.73%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L A+I + G IPL++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSNK-----DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLEAKILEAKQKGYIPLYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_PANTR (Glutamate decarboxylase 1 OS=Pan troglodytes GN=GAD1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++ AAR + ++ G + KL+++ S+Q+H +++KA +G N IK + + P A+I + G +P ++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIIGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_MOUSE (Glutamate decarboxylase 1 OS=Mus musculus GN=Gad1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.153e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L A+I + G +PL++ AT GTT A DP++ Sbjct: 159 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSNK-----DGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLEAKILDAKQKGYVPLYVNATAGTTVYGAFDPIQ 356
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_PONAB (Glutamate decarboxylase 1 OS=Pongo abelii GN=GAD1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++TAAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P A+I + G +P ++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSITAARYKYFLEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_HUMAN (Glutamate decarboxylase 1 OS=Homo sapiens GN=GAD1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.424e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++ AAR + ++ G + KL+++ S+Q+H +++KA +G N IK + + P A+I + G +P ++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQ 357
BLAST of CF832373 vs. ExPASy Swiss-Prot
Match: DCE1_BOVIN (Glutamate decarboxylase 1 OS=Bos taurus GN=GAD1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.084e-11 Identity = 52/206 (25.24%), Postives = 97/206 (47.09%), Query Frame = 2 Query: 131 NNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI---GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTGITAVDPLK 739 ++PES+E IL D + + G+ P +F + I G GE L+S N F + +P +E I + + +++ S +G G+ + + ++ AAR + ++ G + KL+++ S+ +H +++KA +G N IK + + P L +I + G +PL++ AT GTT A DP++ Sbjct: 160 DHPESLEQILVDCRDTLKYGVRTGH-PRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARFKYFPEVKTKGMAAVPKLVLFTSEHSHYSIKKAGAALGFGTDNVILIKCNERGK--IIPADLETKILEAKQKGYVPLYVNATAGTTVYGAFDPIQ 357 The following BLAST results are available for this feature:
BLAST of CF832373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832373 ID=CF832373; Name=CF832373; organism=Citrus sinensis; type=EST; length=739bpback to top |