CF832388

Overview
NameCF832388
Unique NameCF832388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7976 contig Csv1_Contig7976:52..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832388 vs. ExPASy Swiss-Prot
Match: UGAGT_ARATH (Anthocyanin 5-O-glucosyltransferase OS=Arabidopsis thaliana GN=UGT75C1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.018e-12
Identity = 61/211 (28.91%), Postives = 99/211 (46.92%), Query Frame = -2
Query:  190 KKPVLLTGPLVNPEPPSGEL----EERWANWLGKFPPKSVIYCSFGSETF-LTVDQIKELAIGLEITGLPF-FLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRANQKWWR 804
            K  ++  GPLV+      +L    +E +  WL     +SVIY S G+    L    ++ L  G+  T  PF ++V    P    ++  +  +      R  DRG+V  GW  Q  +L H +VGC+V H G++S  E++ S   +V  P   DQ   +KLV    + GV+V +   +G    E+I + ++ VM     E    +R N + W+
Sbjct:  231 KLKMIPIGPLVSSSEGKTDLFKSSDEDYTKWLDSKLERSVIYISLGTHADDLPEKHMEALTHGVLATNRPFLWIVREKNPEEKKKNRFLELI------RGSDRGLV-VGWCSQTAVLAHCAVGCFVTHCGWNSTLESLESGVPVVAFPQFADQCTTAKLVEDTWRIGVKV-KVGEEGDVDGEEIRRCLEKVM--SGGEEAEEMRENAEKWK 431          
BLAST of CF832388 vs. ExPASy Swiss-Prot
Match: UFOG_GENTR (Anthocyanidin 3-O-glucosyltransferase OS=Gentiana triflora PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.276e-11
Identity = 54/221 (24.43%), Postives = 99/221 (44.80%), Query Frame = -2
Query:  205 LAIKTCNEMEGPYLDFVRTQFKKPVLLTGPLVNPEPPSGELEERWANWLGKFPPKSVIYCSFGSETFLTVDQIKELAIGLEITGLPFFLVLNFPPNVDGQSELVRTLPPGFMDRVKDRGVVHTGWVQQQLILRHESVGCYVCHSGFSSVTEAVISDCQLVLLPLKGDQFLNSKLVAGDLKAGVEVNRRDHDGHFGKEDIFKAVKTVMVDVNKEPGASIRAN 867
            +A+ +  E++    + +R+  +  +L  GPL          +     WL      SV+Y SFG+      +++  LA  LE   +PF   L        + E  + LP  F+DR    G +   W  Q  +L + ++G +V H G++S  E++     ++  P  GDQ +N+++V    K GV V      G F +++  + ++ V+     + G  +R N
Sbjct:  215 VAVNSFEEIDPIITNHLRSTNQLNILNIGPLQTLSSSIPPEDNECLKWLQTQKESSVVYLSFGTVINPPPNEMAALASTLESRKIPFLWSL--------RDEARKHLPENFIDRTSTFGKI-VSWAPQLHVLENPAIGVFVTHCGWNSTLESIFCRVPVIGRPFFGDQKVNARMVEDVWKIGVGVK----GGVFTEDETTRVLELVLF---SDKGKEMRQN 419          
The following BLAST results are available for this feature:
BLAST of CF832388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
UGAGT_ARATH1.018e-1228.91Anthocyanin 5-O-glucosyltransferase OS=Arabidopsis... [more]
UFOG_GENTR4.276e-1124.43Anthocyanidin 3-O-glucosyltransferase OS=Gentiana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832388 ID=CF832388; Name=CF832388; organism=Citrus sinensis; type=EST; length=886bp
TTTTTTTTTTTTTTTTGATGATCAAGCACATAAACACATTCGATTCCATA
GAAGACACAGTCACACAAGAAACGCTAAATCAAGAAGGCTGAATGTTATT
TATCTTAGTTTAAATTAAGCTAAGGCTTTGAGATCCTTGACGAAATCTGC
AATAAACTTATCCTGAATCTGTCCGTTCAACAAAAACTCCCTCCACCATT
TCTGATTAGCCCTGATTGAAGCGCCAGGCTCCTTGTTCACATCCACCATA
ACTGTTTTAACAGCCTTAAAGATATCCTCCTTCCCAAAGTGCCCATCGTG
ATCTCTCCTATTTACCTCCACTCCAGCTTTCAAGTCTCCAGCAACGAGCT
TGGAGTTCAAGAATTGGTCACCTTTTAAAGGCAGAAGCACCAATTGACAG
TCACTAATCACAGCTTCAGTCACCGAACTAAATCCTGAGTGACACACGTA
ACATCCAACGCTCTCATGTCTTAAAATGAGCTGCTGTTGCACCCATCCTG
TGTGCACCACTCCCCTGTCTTTCACCCTGTCCATGAACCCTGGAGGCAGA
GTCCGGACCAGCTCACTCTGACCATCGACGTTAGGCGGGAAATTTAAGAC
CAGGAAGAAGGGCAATCCCGTAATTTCCAACCCAATGGCTAACTCTTTGA
TCTGATCAACGGTGAGAAATGTTTCACTTCCGAAAGAGCAATAAATGACA
GACTTGGGAGGAAACTTACCGAGCCAATTAGCCCATCTCTCTTCAAGCTC
CCCGGATGGCGGCTCAGGATTAACAAGTGGACCGGTTAGAAGAACCGGTT
TCTTGAACTGGGTTCTCACGAAATCCAGGTAGGGACCCTCCATTTCATTA
CATGTCTTGATGGCAAGAACATCGCAGCCATCAACG
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