CF832401

Overview
NameCF832401
Unique NameCF832401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:351..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH3_PSEAE (Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas aeruginosa GN=lpd3 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 3.233e-57
Identity = 106/212 (50.00%), Postives = 151/212 (71.23%), Query Frame = -3
Query:  148 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDK 783
            L+PAAGG    L+AD VLV+ GR P+T GLGL+ +G+ +D+ G +  N+   +  PGV+ IGDV  GPMLAHKAEE+ + C+E +AG    ++ + +P V+YT PEVASVG  EEQ++    EY+VG+FPF ANSRAK   ++EG +KIL++  +D++LGVH++ P   E+I EA +A+ + AS+ED+A  CH HPT SEAL++AAM  H +
Sbjct:  253 LQPAAGGATESLQADYVLVAIGRRPYTEGLGLETVGLASDRRGMLE-NQGQRSAAPGVWVIGDVTSGPMLAHKAEEEAIVCIERIAGHAAEMNAEVIPSVIYTQPEVASVGLGEEQLQAARREYKVGRFPFSANSRAKINHESEGFIKILSDARSDQVLGVHMIGPGVSEMIGEACVAMEFSASAEDLALTCHPHPTRSEALRQAAMDVHGR 463          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_THESC (Dihydrolipoyl dehydrogenase OS=Thermus scotoductus GN=lpd PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 2.832e-53
Identity = 108/216 (50.00%), Postives = 142/216 (65.74%), Query Frame = -3
Query:  136 LEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 783
            LE A GG +  +  D +LV+ GR P T GLGL+K GV+ D+ G I VN R  T+ PGVYAIGDV   P+LAHKA ++G+   E  AGK+   D+ +VP VVYT PE A VG TEE+ ++ G   +VGKFPF A+ RA  +  AEG++K++ + ETD +LGV ++ P AGELI EA LA+   A+  D+    H HPT+SE L EAA A H + IHI
Sbjct:  244 LEAAQGGSQEEIVVDKILVAVGRRPRTEGLGLEKAGVKVDERGFIQVNARMETSAPGVYAIGDVARPPLLAHKAMKEGLVAAENAAGKNALFDF-QVPSVVYTGPEWAGVGLTEEEARKAGYNVKVGKFPFSASGRALTLGGAEGLIKVVGDAETDLLLGVFVVGPQAGELIAEATLALEMGATVSDLGLTIHPHPTLSEGLMEAAEALHKQAIHI 458          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEPU (Dihydrolipoamide dehydrogenase OS=Pseudomonas putida GN=lpdG PE=1 SV=4)

HSP 1 Score: 202.986 bits (515), Expect = 1.554e-51
Identity = 100/212 (47.17%), Postives = 144/212 (67.92%), Query Frame = -3
Query:  136 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 771
            A GE+ I   D ++V+ GR P T  L     GV  D+ G I V++  AT++PGVYAIGDV+ G MLAHKA E+G+  VE + G    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G VK++A+ +TD++LGVH++ P+A EL+ +  +A+ +  S+ED+  +  +HPT+SEAL EAA+A +   IH+
Sbjct:  262 AEGEQKIT-FDKLIVAVGRRPVTTDLLAADSGVTIDERGYIFVDDYCATSVPGVYAIGDVVRGMMLAHKASEEGIMVVERIKGHKAQMNYDLIPSVIYTHPEIAWVGKTEQALKAEGVEVNVGTFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGGAIHV 472          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_AZOVI (Dihydrolipoyl dehydrogenase OS=Azotobacter vinelandii PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.651e-51
Identity = 100/212 (47.17%), Postives = 141/212 (66.51%), Query Frame = -3
Query:  136 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 771
            A GEK+    D ++V+ GR P T  L     GV  D+ G I V++  AT++PGVYAIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GV   VG FPF A+ RA A +D  G VK++A+ +TD++LGVH++ P+A EL+ +  +A+ +  S+ED+  +  AHP +SEAL EAA+A     IH+
Sbjct:  262 AEGEKS-QAFDKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDYCATSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGHKAQMNYDLIPAVIYTHPEIAGVGKTEQALKAEGVAINVGVFPFAASGRAMAANDTAGFVKVIADAKTDRVLGVHVIGPSAAELVQQGAIAMEFGTSAEDLGMMVFAHPALSEALHEAALAVSGHAIHV 472          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.905e-51
Identity = 95/202 (47.03%), Postives = 138/202 (68.32%), Query Frame = -3
Query:  136 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 741
            D ++V+ GR P T  L     GV  D+ G I V++   T++PGV+AIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G+VK++A+ +TD++LGVH++ P+A EL+ +  + + +  S+ED+  +  +HPT+SEAL EAA+A +   IHI
Sbjct:  271 DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHI 472          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH2_PSEAE (Dihydrolipoamide dehydrogenase OS=Pseudomonas aeruginosa GN=lpdG PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.905e-51
Identity = 95/202 (47.03%), Postives = 138/202 (68.32%), Query Frame = -3
Query:  136 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 741
            D ++V+ GR P T  L     GV  D+ G I V++   T++PGV+AIGDV+ G MLAHKA E+GV   E +AG    ++YD +P V+YTHPE+A VGKTE+ +K  GVE  VG FPF A+ RA A +D  G+VK++A+ +TD++LGVH++ P+A EL+ +  + + +  S+ED+  +  +HPT+SEAL EAA+A +   IHI
Sbjct:  271 DKLIVAVGRRPVTTDLLAADSGVTLDERGFIYVDDHCKTSVPGVFAIGDVVRGAMLAHKASEEGVMVAERIAGHKAQMNYDLIPSVIYTHPEIAWVGKTEQTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHEAALAVNGHAIHI 472          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.608e-48
Identity = 96/212 (45.28%), Postives = 134/212 (63.21%), Query Frame = -3
Query:  136 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 771
            A GE   ++AD VLV+ GR P T  LGL++IG++    G I V+++  T++P ++AIGD++PGP LAHKA  +G    E +AG    VDY  +P VV++ PE ASVG  E+Q K+ G++    KFPF AN RA A++D +G +K++  KE   I+G  I+ PNA ++I E  LAI    ++EDIA   HAHPT+ E   EAA      PIHI
Sbjct:  256 ANGETKTIDADYVLVTVGRRPNTDELGLEQIGIKMTNRGLIEVDQQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAGHPSAVDYVAIPAVVFSDPECASVGYFEQQAKDEGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVALGTPIHI 467          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.567e-46
Identity = 90/210 (42.86%), Postives = 132/210 (62.86%), Query Frame = -3
Query:  136 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 765
            GE+  ++AD VL++ GR P T  LGL+++G+E    G +  +++  TN+P +YAIGD+I GP LAHKA  +G    E +AG+   +DY  +P VV++ PE+ASVG TE Q KE G++    KFPF AN RA ++++ +G +K++  KE   ++G  I   +A ++I E  LAI    ++EDIA   HAHPT+ E   EAA      PIHI
Sbjct:  259 GEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGIVKTDKQCRTNVPNIYAIGDIIEGPPLAHKASYEGKIAAEAIAGEPAEIDYLGIPAVVFSEPELASVGYTEAQAKEEGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHI 468          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_STAAW (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=pdhD PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43
Identity = 90/211 (42.65%), Postives = 129/211 (61.14%), Query Frame = -3
Query:  139 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 771
            A GE+  +EAD VLV+ GR P T  LGL+++GV+    G + V+++  T+I  +YAIGD++PG  LAHKA  +     E + G+   VDY  +P V +T PE+A+VG +E Q KE G+  +  KFP+ AN RA ++DD  G VK++  KE D ++G  ++   A ++I E  LAI    ++EDIA   HAHPT+ E   EAA      PIH
Sbjct:  256 AKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIH 466          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_STAAU (Dihydrolipoyl dehydrogenase OS=Staphylococcus aureus GN=pdhD PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.558e-43
Identity = 90/211 (42.65%), Postives = 129/211 (61.14%), Query Frame = -3
Query:  139 AGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 771
            A GE+  +EAD VLV+ GR P T  LGL+++GV+    G + V+++  T+I  +YAIGD++PG  LAHKA  +     E + G+   VDY  +P V +T PE+A+VG +E Q KE G+  +  KFP+ AN RA ++DD  G VK++  KE D ++G  ++   A ++I E  LAI    ++EDIA   HAHPT+ E   EAA      PIH
Sbjct:  256 AKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLPLAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKLITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIH 466          
The following BLAST results are available for this feature:
BLAST of CF832401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
DLDH3_PSEAE3.233e-5750.00Dihydrolipoyl dehydrogenase 3 OS=Pseudomonas aerug... [more]
DLDH_THESC2.832e-5350.00Dihydrolipoyl dehydrogenase OS=Thermus scotoductus... [more]
DLDH2_PSEPU1.554e-5147.17Dihydrolipoamide dehydrogenase OS=Pseudomonas puti... [more]
DLDH_AZOVI2.651e-5147.17Dihydrolipoyl dehydrogenase OS=Azotobacter vinelan... [more]
DLDH_PSEFL5.905e-5147.03Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]
DLDH2_PSEAE5.905e-5147.03Dihydrolipoamide dehydrogenase OS=Pseudomonas aeru... [more]
DLDH1_BACST1.608e-4845.28Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH1_BACSU2.567e-4642.86Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_STAAW1.558e-4342.65Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]
DLDH_STAAU1.558e-4342.65Dihydrolipoyl dehydrogenase OS=Staphylococcus aure... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832401 ID=CF832401; Name=CF832401; organism=Citrus sinensis; type=EST; length=785bp
TTTTTTTTGAGCAATACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGG
ACAATTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTC
AAACAAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTT
GTCGTGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGAT
GTGCATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATG
GCCAGGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATG
AACCCCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTC
CTTCAGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAAT
TTCCCCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTT
CCCAACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTAT
CATAGTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACC
CCATCCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCC
AATCGCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTA
TCCGTCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCA
GCGGTGAATGGAGTCCGGCCAGCAGACACAAGAACAACATCAGCTTCAAG
TATGGTCTTTTCACCACCAGCTGCTGGTTCAAGGG
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