CF832401

Overview
NameCF832401
Unique NameCF832401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:351..1134. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CHLTR (Dihydrolipoyl dehydrogenase OS=Chlamydia trachomatis GN=lpdA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.573e-38
Identity = 81/204 (39.71%), Postives = 118/204 (57.84%), Query Frame = -3
Query:  136 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIHI 747
            E D VLVS GR   T  +GLDK GV  D+ G IP +    TN+P +YAIGD+     LAH A   G+     +AG    +DY  VP V++T PEVASVG +    ++  +  +V KFPF A  +A A+ +A+G   I++ + T +ILG +++ P+A  LI E  LA+  + +   I    HAHPT++E   E+A+   D P+H+
Sbjct:  257 EYDYVLVSIGRRLNTENIGLDKAGVICDERGVIPTDATMRTNVPNIYAIGDITGKWQLAHVASHQGIIAARNIAGHKEEIDYSAVPSVIFTFPEVASVGLSPTAAQQQKIPVKVTKFPFRAIGKAVAMGEADGFAAIISHETTQQILGAYVIGPHASSLISEITLAVRNELTLPCIYETIHAHPTLAEVWAESALLAVDTPLHM 460          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CHLPN (Dihydrolipoyl dehydrogenase OS=Chlamydia pneumoniae GN=lpdA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.361e-38
Identity = 80/203 (39.41%), Postives = 121/203 (59.61%), Query Frame = -3
Query:  139 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 747
            E D VLV+ GR   TA +GLD  GV  D  G IPV+E   TN+P +YAIGD+    +LAH A   GV   + ++G H  +DY  +P V++THPE+A VG + ++ ++  +  ++ KFPF A  +A A+  ++G   I++ + T +ILG +++ P+A  LI E  LAI  + +   I    HAHPT+SE   E A+   + P+H
Sbjct:  254 EFDYVLVAIGRQFNTASIGLDNAGVIRDDRGVIPVDETMRTNVPNIYAIGDITGKWLLAHVASHQGVIAAKNISGHHEVMDYSAIPSVIFTHPEIAMVGLSLQEAEQQNLPAKLTKFPFKAIGKAVALGASDGFAAIVSHEITQQILGAYVIGPHASSLIGEMTLAIRNELTLPCIYETVHAHPTLSEVWAEGALLATNHPLH 456          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_RHIET (Probable dihydrolipoyl dehydrogenase (Fragment) OS=Rhizobium etli PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.845e-37
Identity = 83/208 (39.90%), Postives = 128/208 (61.54%), Query Frame = -3
Query:  148 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHG--HVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDK 765
            G+   + AD ++ + G       LGL+ +GV TD+   +  +    TN+ G+YAIGDV   P++AHKAE +GV CVE +AG       D  KVPG  Y +P+VASVG TE + KELG + RVG+F F AN +A A+ + +G+VK++ +K+T ++LG H++     ELI   V+A+N + + E++      HPT+SE +KEA +  + +
Sbjct:   70 GKVQQITADRMISAVGVQGNIENLGLEALGVLTDRRWLV-ADGYGKTNVAGIYAIGDVAGPPIVAHKAEHEGVVCVEKIAGVPNVHPTDKGKVPGCTYCNPQVASVGLTEAKAKELGSDIRVGRFSFAANRKAIALGEDQGMVKVIFDKKTGELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDAYGR 276          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_BUCAP (Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=lpdA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.409e-36
Identity = 79/192 (41.15%), Postives = 120/192 (62.50%), Query Frame = -3
Query:  166 DVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 741
            D +LV+ GR+P    LGL+KIG++ ++ G I +N++  TNI  +YAIGDV   PMLAHKA +      E ++GK  + +   +P V YT PE+A VG +E++ +   ++Y V  FP+ A+ RA A +   G+ K++  K T+KI+G  I+  NA ELI E  LAI   + +EDI+   H HPT+SE++  A+
Sbjct:  266 DNILVAIGRSPNVDFLGLEKIGLKLNESGFIEINQQLKTNISHIYAIGDVTGFPMLAHKAVQQAHIAAEVISGKKHYFEPKVIPSVAYTDPEIAWVGLSEKEAENNDIDYEVSLFPWSASGRAHASNCTLGMTKLIFNKNTNKIIGGSIIGTNASELISEIGLAIEMGSDAEDISLTIHPHPTLSESISLAS 457          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 4.109e-36
Identity = 85/203 (41.87%), Postives = 117/203 (57.64%), Query Frame = -3
Query:  169 LEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFAT-----NIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVE----YRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEA 750
            LE D  LV+ GR P T  LGL+ +GVETD+ G I VN++         +P ++A+GD     MLAH A   GV  VE + G+   VDY  +P   +THPE++ VG TE Q KELG +        K  F  NS+A A  + +GI K++  ++T ++LG HI+  +A +LI EA  AI    S  ++A   HAHPT+SE L EA
Sbjct:  267 LEVDACLVATGRIPATKNLGLETVGVETDRRGFIEVNDQMQVIKDGKPVPHLWAVGDATGKMMLAHAASGQGVVAVENICGRKTEVDYRAIPAAAFTHPEISYVGLTEAQAKELGEKEGFVVSTAKTYFKGNSKALAEKETDGIAKVVYRQDTGELLGAHIIGIHASDLIQEAAQAIADRKSVRELAFHVHAHPTLSEVLDEA 469          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CHLP8 (Dihydrolipoyl dehydrogenase OS=Chlorobaculum parvum (strain NCIB 8327) GN=lpd PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.933e-35
Identity = 88/206 (42.72%), Postives = 118/206 (57.28%), Query Frame = -3
Query:  160 AAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMA 774
            A G E   +EA  +LV+ G T    GLGLD  G+ET++ G I  +E   T+  G+YAIGDV  G +LAHKA  +    VE +AGK    +    +P  VY  P VASVG TEE     G +  VG+  F A+ +A A    EG VK++   ET K+LG H++  +A ELI E  LA  Y  ++E +    HAHPT+SE ++EAA A
Sbjct:  259 AEGKEPQKIEASCMLVAVGVTGVIDGLGLDAAGIETER-GFIRTDELCRTSASGIYAIGDVRGGMLLAHKASAEAAIAVEAIAGKLPEPLSEPLIPRCVYAQPSVASVGLTEEAAIAAGYKVLVGRSQFAASGKANAYGQLEGFVKLVFNAETGKMLGGHLIGHDAVELIGELGLACRYGVTAEGLVGTVHAHPTLSETVREAAFA 463          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH3_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=acoL PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.012e-34
Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = -3
Query:  139 EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPIH 747
            +AD VLV+ GR P   GL L++ GV+    G IPVN    TN+P +YA GD I G  LAH A  +G+      +G+   ++   VP  +YT PE+A +G TE Q + +  + ++G+F F AN +A     AEG VKI+AE E  +I+GV ++ P+  ELI +A   +N + +++       AHPT+SE L EA ++T    +H
Sbjct:  256 KADYVLVAIGRKPRLDGLQLEQAGVDFSPKG-IPVNGHMQTNVPHIYACGDAIGGIQLAHAAFHEGIIAASHASGRDVKINEKHVPRCIYTSPEIACIGMTERQARSIYGDVKIGEFSFSANGKALIKQQAEGKVKIMAEPEFGEIVGVSMIGPDVTELIGQAAAIMNGEMTADMAEHFIAAHPTLSETLHEALLSTIGLAVH 457          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_CHLTE (Dihydrolipoyl dehydrogenase OS=Chlorobium tepidum GN=lpd PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.846e-34
Identity = 84/202 (41.58%), Postives = 115/202 (56.93%), Query Frame = -3
Query:  166 GGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGH-VDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAA 768
            G     L A  +LV+ G T    GLGLD +GVET++ G I  + +  T+ PG+YAIGDV  G +LAHKA  +    VE +AGK    +    +P  VY  P VASVG TEE     G +  VG+  F A+ +A A    EG VK++ +  T K+LG H++  +A ELI E  LA  Y  ++  +    HAHPT+SE ++EAA
Sbjct:  261 GSAPQTLNASCLLVAVGVTGAIDGLGLDAVGVETER-GFIRTDGQCRTSAPGIYAIGDVRGGMLLAHKASAEAAIAVEAIAGKSPEPLSEPLIPRCVYAQPSVASVGLTEEAAVNAGYQVAVGRSQFAASGKANAYGQLEGFVKLVFDAATGKMLGGHLIGHDAVELIGELGLACRYGVTAGGLVNTVHAHPTLSETVREAA 461          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: DLDH_MYCLE (Dihydrolipoyl dehydrogenase OS=Mycobacterium leprae GN=lpd PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.119e-33
Identity = 78/200 (39.00%), Postives = 114/200 (57.00%), Query Frame = -3
Query:  172 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHV--DYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 765
            G+   L+AD VL + G  P   G GLDK+GV       + +++   TN+  +YAIGDV     LAH AE  GV   E +AG       DY  +P   +  P VAS G TE+Q ++ G +  V KFPF AN++A  + D  G VK++A+ +  ++LG H++  N  EL+ E  LA  +D ++ ++ R  H HPT+SEAL+E
Sbjct:  256 GQFQELKADKVLQAIGFAPNVDGYGLDKVGVALTADKAVDIDDYMQTNVSHIYAIGDVTGKLQLAHVAEAQGVVAAEAIAGAETLALSDYRMMPRATFCQPNVASFGLTEQQARDGGYDVVVAKFPFTANAKAHGMGDPSGFVKLVADAKYGELLGGHMIGHNVSELLPELTLAQKWDLTATELVRNVHTHPTLSEALQE 455          
BLAST of CF832401 vs. ExPASy Swiss-Prot
Match: MERA_BACCE (Mercuric reductase OS=Bacillus cereus GN=merA PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.237e-32
Identity = 76/209 (36.36%), Postives = 118/209 (56.46%), Query Frame = -3
Query:  142 GEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAE-EDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVKILAEKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKEAAMATHDKPI 765
            G+K I+EA+ +L++ GR P    L L   GVE    G I +++   T    +Y+ GDV PGP   + A  E G+A    + G +  V+ + VPGV +T P +A+VG TE+Q KE G E +    P  A  RA    +  G+ K++A+ +T K+LG H++A NAG++I+ A LA+ +  +  D+      + TM+E LK  A+ T DK +
Sbjct:  416 GKKRIIEAEQLLIATGRKPIQTSLNLHAAGVEVGSRGEIVIDDYLKTTNSRIYSAGDVTPGPQFVYVAAYEGGLAARNAIGGLNQKVNLEVVPGVTFTSPSIATVGLTEQQAKEKGYEVKTSVLPLDAVPRALVNRETTGVFKLVADAKTLKVLGAHVVAENAGDVIYAATLAVKFGLTVGDLRETMAPYLTMAEGLK-LAVLTFDKDV 623          
The following BLAST results are available for this feature:
BLAST of CF832401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
DLDH_CHLTR2.573e-3839.71Dihydrolipoyl dehydrogenase OS=Chlamydia trachomat... [more]
DLDH_CHLPN3.361e-3839.41Dihydrolipoyl dehydrogenase OS=Chlamydia pneumonia... [more]
DLDH_RHIET2.845e-3739.90Probable dihydrolipoyl dehydrogenase (Fragment) OS... [more]
DLDH_BUCAP2.409e-3641.15Dihydrolipoyl dehydrogenase OS=Buchnera aphidicola... [more]
DLDH_SYNY34.109e-3641.87Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (... [more]
DLDH_CHLP85.933e-3542.72Dihydrolipoyl dehydrogenase OS=Chlorobaculum parvu... [more]
DLDH3_BACSU1.012e-3438.92Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH_CHLTE3.846e-3441.58Dihydrolipoyl dehydrogenase OS=Chlorobium tepidum ... [more]
DLDH_MYCLE1.119e-3339.00Dihydrolipoyl dehydrogenase OS=Mycobacterium lepra... [more]
MERA_BACCE1.237e-3236.36Mercuric reductase OS=Bacillus cereus GN=merA PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832401 ID=CF832401; Name=CF832401; organism=Citrus sinensis; type=EST; length=785bp
TTTTTTTTGAGCAATACAAATTTCTATTAAAGCATCTGCTTCAAAGCTGG
ACAATTGAGAAAACAGAAGAACGTCTTTTTCAAGATATCTGAAAAATCTC
AAACAAAAAATAACAAAGTAATAACCCGCTTCTCAGATGTGAATGGGTTT
GTCGTGAGTGGCCATAGCAGCCTCCTTCAATGCCTCACTCATTGTAGGAT
GTGCATGGCACACACGTGCAATGTCCTCACTTGATGCATCATAATTAATG
GCCAGGACAGCCTCGTGGATGAGCTCTCCAGCATTGGGTGCCATAATATG
AACCCCCAATATCTTGTCTGTCTCTTTCTCAGCCAAAATCTTGACTATTC
CTTCAGCATCATCAATAGCTTTTGCTCGGCTATTTGCCAAGAAAGGGAAT
TTCCCCACACGGTACTCAACACCAAGTTCCTTTACCTGCTCCTCAGTCTT
CCCAACTGAAGCAACCTCAGGGTGTGTGTAGACAACTCCAGGGACCTTAT
CATAGTCCACATGGCCATGTTTACCAGCTAAGAATTCAACACAAGCAACC
CCATCCTCTTCTGCCTTGTGAGCTAACATTGGTCCTGGAATTACGTCTCC
AATCGCATAAACACCAGGTATGTTTGTAGCAAATCTCTCATTAACTGGTA
TCCGTCCCATCTTATCGGTTTCCACTCCTATCTTATCCAGCCCGAGCCCA
GCGGTGAATGGAGTCCGGCCAGCAGACACAAGAACAACATCAGCTTCAAG
TATGGTCTTTTCACCACCAGCTGCTGGTTCAAGGG
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