CF832402

Overview
NameCF832402
Unique NameCF832402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.603e-55
Identity = 100/219 (45.66%), Postives = 146/219 (66.67%), Query Frame = -3
Query:  209 DQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 865
            D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV           ++K+ HIKGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+    S   F LD   L+    G+ER+K++F ALA + GF  ++  C   +++VME YK
Sbjct:  146 DYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.947e-54
Identity = 97/220 (44.09%), Postives = 141/220 (64.09%), Query Frame = -3
Query:  209 KDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 868
            KD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PHI G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T  ++  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  145 KDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 5.155e-54
Identity = 100/221 (45.25%), Postives = 143/221 (64.71%), Query Frame = -3
Query:  209 KDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPE-GDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 868
            KD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV           +S++PHI+GIN+D+PHVI +A  +PG+EHVGGDM+  +P  GDAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T   +  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  148 KDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.500e-53
Identity = 98/220 (44.55%), Postives = 140/220 (63.64%), Query Frame = -3
Query:  209 KDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 868
            KD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV            S +P IKGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP   ++   ++  F +D I L   P GRER ++EF  LA  AGF G        N++ +EF K
Sbjct:  143 KDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.648e-50
Identity = 91/188 (48.40%), Postives = 128/188 (68.09%), Query Frame = -3
Query:  305 KDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERT 868
            KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV           ++KYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD + +++    +D I L     G+ERT
Sbjct:  126 KDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.674e-47
Identity = 94/221 (42.53%), Postives = 137/221 (61.99%), Query Frame = -3
Query:  209 KDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 868
            KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV           ++K+PHI+GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V  +   S ++   D + +   P G+ERT  EF  LA  AGF    F       +VMEF+K
Sbjct:  158 KDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.317e-44
Identity = 90/222 (40.54%), Postives = 141/222 (63.51%), Query Frame = -3
Query:  209 KDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSY-VMEFYK 868
            K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV           ISKYP IKGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E S+    LD +  I +  GRERT+K++  L+  +GF      C   NS  VMEFYK
Sbjct:  152 KEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.753e-31
Identity = 74/205 (36.10%), Postives = 117/205 (57.07%), Query Frame = -3
Query:  260 KDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 868
            KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D  E S    ILD   L+    G+ERTK+ +  +   AGF G
Sbjct:  131 KDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDH-ELSSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.150e-27
Identity = 68/200 (34.00%), Postives = 113/200 (56.50%), Query Frame = -3
Query:  260 EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 853
            E   ++ KALG + + Y+      N++FN  M   +  +++ +V+     F  IT LVDV            + +PHIK   +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L  V      ++    LD   ++    G+ERT++E+  L  +AG+KG
Sbjct:  132 ESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.323e-25
Identity = 64/206 (31.07%), Postives = 113/206 (54.85%), Query Frame = -3
Query:  263 KDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 868
            K  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  131 KKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
The following BLAST results are available for this feature:
BLAST of CF832402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
IMT1_MESCR1.603e-5545.66Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE3.947e-5444.09Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ5.155e-5445.25Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF1.500e-5344.55Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_EUCGL2.648e-5048.40Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA4.674e-4742.53(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA6.317e-4440.54Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA2.753e-3136.103'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA3.150e-2734.00(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
7OMT6_MEDSA1.323e-2531.07Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832402 ID=CF832402; Name=CF832402; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTTTATACCAAACACAAACAGGACTTATATCATTGAA
CACACAAAAGCATTACATAAGAAGTTCCCGCGAGCCATAAAGGCCAAACA
AAACAGAAAGTTACAGAAAAGAAAATGGAGTATCGACACTCCAAATTAAA
ATTGAGAAGATGCATCTTTCTGATAAAGAAAGAATGAAGCAATCTAGCTT
CAAAGTTACTTGTAGAATTCCATGACATAGGAATTGCAAACGTTACATTC
AAAGTTGATACCCTTAAATCCAGCTTCGATTGCCAATGCAGTGAACTCCT
TTTTGGTCCGCTCCCTTCCATGAGGAATTTGGATTAAAAAAATTGCATCT
AAAATGAAGGAATCCCTTGAAGCCTCGGTACTGTCAGGCACTTCTGGCAA
CGTTGAGTTAATAACAAGTACCTTTCCATCATTTGGAAGAGCTTTGTAAC
AATTCCTCAGTATCTTTATGCAATTCTCATCATCAAAATTATGAAGCATC
CACTTCATTAAAATGGCATCCCCCTCTGGAATTTTTTGGTACATATCTCC
GCCAACATGTTCCATGCCGGGATAAGATGAGGCATCTTTTATAACATGAG
GTACGTCAAAATTAATACCCTTAATATGAGGGTATTTGGAAATTATGGTC
GCAAGGGTGATTCCTAAACCACCGCCAACGTCAACAAGGCGCGTAATATT
CTGAAAGCCTTTGTAGGATTCTACAATCTTATTGATTACAAAAGAAGTCT
GGCCGATCATTCCATTGTTGAAAACTTCATTGAACCTGGAGTCGGTGCCC
AGATAATCGTAGAAATCCATTCCGAGGGCTTTATTATACGAAAGTTCTCC
TTCAAGAATTTGGTCTTTCA
back to top