CF832402

Overview
NameCF832402
Unique NameCF832402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.373e-14
Identity = 55/208 (26.44%), Postives = 100/208 (48.08%), Query Frame = -3
Query:  263 ILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASSYPGMEHVG-------GDMYQKIPEG-DAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 859
            I  GE ++++  G DF+ YL      +  F + M   T  +   +  E    F +   +VD+           +S +P ++G+ FD P   +DA++      VG       GD + ++P G D  ++K +LH++ D     ILR    A+P   ++LV+   LP+  DS+ A    ++ D   L+ +  GRER++++  +L  + GF+
Sbjct:  150 IRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS-AHPLGYLSDLYMLVNM-GGRERSERDLRSLLSDTGFR 355          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.793e-14
Identity = 56/205 (27.32%), Postives = 105/205 (51.22%), Query Frame = -3
Query:  263 GELSYNKALGMD-FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG--FQNITRLVDVXXXXXXXXXXXISKYPHIK-GINFDVPHVIKDAS-----SYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 850
            G  +  K++G++ F++      ++ ++FN  M   T   I+ I +S KG  F     +VD+           +  YP IK GINFD+  VI  +      S+P + H+ G+ ++ +PE D  +MK++LH++  ++C+KIL+   K++  + K+ +    +   P    +  +++I   I + Q+ + +ERT  E+  L   A FK
Sbjct:  140 GHSNATKSVGVNHFWELFDLHPQYKDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIIID--PRKGYSKYETYI--DILMFQMVNAKERTLDEWKELFELADFK 339          
BLAST of CF832402 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.133e-11
Identity = 55/212 (25.94%), Postives = 92/212 (43.40%), Query Frame = -3
Query:  257 DQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSF--VINKIVESYKGFQNITRLVDVXXXXXXXXXXXISKYPHIKGINFDVPHVIKDASS--YPGME-----HVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGI 865
            D + EG   Y +A G+   D  G   R  E     + GQ S   +  + V +       T++ D+           +  YP+     +D+P V++ A     P  E     H G      IPE D  ++  +LH++DD+ C ++L   YKA    G VL++ S L E       ++    L ++ ++    G+ERT  E++ L   AGF+ +
Sbjct:  123 DAVREGRNQYERAFGISSKDLFGARYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYDLGGGGGALAQECVFLYPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLLSEDRSGPVETQ----LYSLNMLVQTEGKERTAVEYSELLGAAGFREV 330          
The following BLAST results are available for this feature:
BLAST of CF832402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
DMPM_STRAD1.373e-1426.44O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]
OMT9_DICDI1.793e-1427.32O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
HIOM_CHICK4.133e-1125.94Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832402 ID=CF832402; Name=CF832402; organism=Citrus sinensis; type=EST; length=870bp
TTTTTTTTTTTTTTTTTATACCAAACACAAACAGGACTTATATCATTGAA
CACACAAAAGCATTACATAAGAAGTTCCCGCGAGCCATAAAGGCCAAACA
AAACAGAAAGTTACAGAAAAGAAAATGGAGTATCGACACTCCAAATTAAA
ATTGAGAAGATGCATCTTTCTGATAAAGAAAGAATGAAGCAATCTAGCTT
CAAAGTTACTTGTAGAATTCCATGACATAGGAATTGCAAACGTTACATTC
AAAGTTGATACCCTTAAATCCAGCTTCGATTGCCAATGCAGTGAACTCCT
TTTTGGTCCGCTCCCTTCCATGAGGAATTTGGATTAAAAAAATTGCATCT
AAAATGAAGGAATCCCTTGAAGCCTCGGTACTGTCAGGCACTTCTGGCAA
CGTTGAGTTAATAACAAGTACCTTTCCATCATTTGGAAGAGCTTTGTAAC
AATTCCTCAGTATCTTTATGCAATTCTCATCATCAAAATTATGAAGCATC
CACTTCATTAAAATGGCATCCCCCTCTGGAATTTTTTGGTACATATCTCC
GCCAACATGTTCCATGCCGGGATAAGATGAGGCATCTTTTATAACATGAG
GTACGTCAAAATTAATACCCTTAATATGAGGGTATTTGGAAATTATGGTC
GCAAGGGTGATTCCTAAACCACCGCCAACGTCAACAAGGCGCGTAATATT
CTGAAAGCCTTTGTAGGATTCTACAATCTTATTGATTACAAAAGAAGTCT
GGCCGATCATTCCATTGTTGAAAACTTCATTGAACCTGGAGTCGGTGCCC
AGATAATCGTAGAAATCCATTCCGAGGGCTTTATTATACGAAAGTTCTCC
TTCAAGAATTTGGTCTTTCA
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