CF832403

Overview
NameCF832403
Unique NameCF832403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:505..1298. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.208e-64
Identity = 116/260 (44.62%), Postives = 167/260 (64.23%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 786
            R++  AP+  Y  S+    S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV            +K+ HIKGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+    S   F LD   L+    G+ER+K++F ALA + GF  ++  C   +++VME YK
Sbjct:  105 RVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 4.024e-63
Identity = 113/260 (43.46%), Postives = 164/260 (63.08%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 786
            R +S APV K+   +  GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PHI G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T  ++  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  105 RRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.171e-62
Identity = 115/261 (44.06%), Postives = 165/261 (63.22%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPE-GDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 786
            R ++ APV K+   +  GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV            S++PHI+GIN+D+PHVI +A  +PG+EHVGGDM+  +P  GDAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T   +  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  108 RRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.529e-62
Identity = 114/260 (43.85%), Postives = 163/260 (62.69%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 786
            R +S APV K+   +  GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV            S +P IKGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP   ++   ++  F +D I L   P GRER ++EF  LA  AGF G        N++ +EF K
Sbjct:  103 RRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 9.276e-60
Identity = 105/228 (46.05%), Postives = 151/228 (66.23%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERT 690
            RL+ LAP+ K+ V +  GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD + +++    +D I L     G+ERT
Sbjct:   86 RLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.533e-51
Identity = 102/261 (39.08%), Postives = 157/261 (60.15%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 786
            R++ L   ++  V+    VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV            +K+PHI+GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V  +   S ++   D + +   P G+ERT  EF  LA  AGF    F       +VMEF+K
Sbjct:  118 RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.064e-47
Identity = 97/262 (37.02%), Postives = 155/262 (59.16%), Query Frame = 1
Query:    7 RLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSY-VMEFYK 786
            R++ L+ V KY V D     +  +        ++  W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV            SKYP IKGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E S+    LD +  I +  GRERT+K++  L+  +GF      C   NS  VMEFYK
Sbjct:  112 RVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.349e-34
Identity = 85/247 (34.41%), Postives = 136/247 (55.06%), Query Frame = 1
Query:    1 GVRLHSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 735
            G + ++L P+A   +S +   SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D  E S    ILD   L+    G+ERTK+ +  +   AGF G
Sbjct:   90 GQKKYALEPIATL-LSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDH-ELSSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.304e-31
Identity = 82/244 (33.61%), Postives = 133/244 (54.51%), Query Frame = 1
Query:   13 HSLAPVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 735
            + LAP AKY V       +   + ++ DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V+     F  IT LVDV            + +PHIK   +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L  V      ++    LD   ++    G+ERT++E+  L  +AG+KG
Sbjct:   89 YGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL-NVQSEHPYTKMRLTLDLDMMLN-TGGKERTEEEWKKLIHDAGYKG 329          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.489e-28
Identity = 68/226 (30.09%), Postives = 122/226 (53.98%), Query Frame = 1
Query:   67 MRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 732
            + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  111 LAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
The following BLAST results are available for this feature:
BLAST of CF832403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
IMT1_MESCR6.208e-6444.62Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_MAIZE4.024e-6343.46Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.171e-6244.06Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF1.529e-6243.85Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_EUCGL9.276e-6046.05Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
SMT_COPJA3.533e-5139.08(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA1.064e-4737.02Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA1.349e-3434.413'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA5.304e-3133.61(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
7OMT6_MEDSA5.489e-2830.09Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01M22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832403 ID=CF832403; Name=CF832403; organism=Citrus sinensis; type=EST; length=794bp
GGAGTAAGGCTCCATAGTCTCGCTCCTGTCGCTAAATACTATGTGAGTGA
TCACATCGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAG
TAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAA
CTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCAC
CGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTT
CTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATT
ACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCAT
AATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATG
TTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGAT
ATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCT
TCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACA
AAGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCA
GAAGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGC
AATTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCAAAAAGGAGT
TCACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGT
AACGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTG
back to top