CF832403

Overview
NameCF832403
Unique NameCF832403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length794
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:505..1298. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.074e-15
Identity = 57/220 (25.91%), Postives = 101/220 (45.91%), Query Frame = 1
Query:  100 VMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVG-------GDMYQKIPEG-DAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 732
            V    W      I  GE ++++  G DF+ YL      +  F + M   T  +   +  E    F +   +VD+            S +P ++G+ FD P   +DA++      VG       GD + ++P G D  ++K +LH++ D     ILR    A+P   ++LV+   LP+  DS+ A    ++ D   L+ +  GRER++++  +L  + GF+
Sbjct:  138 VFRQAWSHFDHSIRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS-AHPLGYLSDLYMLVNM-GGRERSERDLRSLLSDTGFR 355          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.960e-15
Identity = 57/212 (26.89%), Postives = 106/212 (50.00%), Query Frame = 1
Query:  124 LKDQILEGELSYNKALGMD-FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG--FQNITRLVDVXXXXXXXXXXXXSKYPHIK-GINFDVPHVIKDAS-----SYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 732
            L +    G  +  K++G++ F++      ++ ++FN  M   T   I+ I +S KG  F     +VD+              YP IK GINFD+  VI  +      S+P + H+ G+ ++ +PE D  +MK++LH++  ++C+KIL+   K++  + K+ +    +   P    +  +++I   I + Q+ + +ERT  E+  L   A FK
Sbjct:  133 LPETFANGHSNATKSVGVNHFWELFDLHPQYKDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKIHLFEIIID--PRKGYSKYETYI--DILMFQMVNAKERTLDEWKELFELADFK 339          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: HIOM_CHICK (Hydroxyindole O-methyltransferase OS=Gallus gallus GN=ASMT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.451e-12
Identity = 57/217 (26.27%), Postives = 93/217 (42.86%), Query Frame = 1
Query:  115 WFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSF--VINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS--YPGME-----HVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGI 738
            W  L D + EG   Y +A G+   D  G   R  E     + GQ S   +  + V +       T++ D+              YP+     +D+P V++ A     P  E     H G      IPE D  ++  +LH++DD+ C ++L   YKA    G VL++ S L E       ++    L ++ ++    G+ERT  E++ L   AGF+ +
Sbjct:  118 WHYLTDAVREGRNQYERAFGISSKDLFGARYRSEEEMLKFLAGQNSIWSICGRDVLTAFDLSPFTQIYDLGGGGGALAQECVFLYPNCTVTIYDLPKVVQVAKERLVPPEERRIAFHEGDFFKDSIPEADLYILSKILHDWDDKKCRQLLAEVYKACRPGGGVLLVESLLSEDRSGPVETQ----LYSLNMLVQTEGKERTAVEYSELLGAAGFREV 330          
BLAST of CF832403 vs. ExPASy Swiss-Prot
Match: TCMN_STRGA (Multifunctional cyclase-dehydratase-3-O-methyl transferase tcmN OS=Streptomyces glaucescens GN=tcmN PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 6.097e-11
Identity = 62/252 (24.60%), Postives = 116/252 (46.03%), Query Frame = 1
Query:   25 PVAKYYVSDHIGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTS-FVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEH---------VGGDMY-QKIPEG-DAILMKWMLHNFDDENCIKILRNCYKAL-PNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGIN 741
            P+ KY   +++ ++ RPY     D++M          +  GE ++ +  G  F+++L  +    E F   M   +   V++ + +  +G +  +R+ D+             ++PH  G+  D+P V   AS+ P +E          + GD +   +P G DA L K +LHN+ DE  + +LR   +A+  +D ++L+ +  +     + E   D   L  I ++ +  GRER   E+  L +EA F  +N
Sbjct:  254 PLVKY---NNMELTRRPY-----DEIM--------HSVRTGEPAFRRVFGSSFFEHLEANPEAGEFFERFMAHWSRRLVLDGLAD--QGMERFSRIADLGGGDGWFLAQILRRHPHATGLLMDLPRVA--ASAGPVLEEAKVADRVTVLPGDFFTDPVPTGYDAYLFKGVLHNWSDERAVTVLRRVREAIGDDDARLLIFDQVM-----APENEWDHAKLLDIDMLVLFGGRERVLAEWRQLLLEADFDIVN 480          
The following BLAST results are available for this feature:
BLAST of CF832403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
DMPM_STRAD1.074e-1525.91O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]
OMT9_DICDI6.960e-1526.89O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
HIOM_CHICK1.451e-1226.27Hydroxyindole O-methyltransferase OS=Gallus gallus... [more]
TCMN_STRGA6.097e-1124.60Multifunctional cyclase-dehydratase-3-O-methyl tra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01M22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832403 ID=CF832403; Name=CF832403; organism=Citrus sinensis; type=EST; length=794bp
GGAGTAAGGCTCCATAGTCTCGCTCCTGTCGCTAAATACTATGTGAGTGA
TCACATCGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGACAAAG
TAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGGAGAA
CTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGGGCAC
CGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAGACTT
CTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATT
ACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCAT
AATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCTCATG
TTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGGAGAT
ATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCT
TCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGTTACA
AAGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCA
GAAGTGCCTGACAGTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGC
AATTTTTTTAATCCAAATTCCTCATGGAAGGGAGCGGACCAAAAAGGAGT
TCACTGCATTGGCAATCGAAGCTGGATTTAAGGGTATCAACTTTGAATGT
AACGTTTGCAATTCCTATGTCATGGAATTCTACAAGTAACTTTG
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