CF832404

Overview
NameCF832404
Unique NameCF832404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:825..1654. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: TCMO_RUTGR (Trans-cinnamate 4-monooxygenase OS=Ruta graveolens GN=CYP73A2 PE=2 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 7.214e-92
Identity = 153/214 (71.50%), Postives = 168/214 (78.50%), Query Frame = -1
Query:  190 ERKTCACSKSMSN*SLKCAIDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 831
            ERK    +KSM+  + KCAIDH+LDAQ KGEI EDNVLYIVENINVAAIETTLWSIEWGIAE+VNHP+IQKKL  E+D V+G  HQITE DTHKLPYLQAVIKET+RLRMAIP+LVPHMNL DAKL GYD+PAESKI+VNAWW+ANNPA WK             ES VEANGNDFRY+PFGVGRRSC              GR+VQNFELLPP
Sbjct:  260 ERKKLTSTKSMTEENFKCAIDHVLDAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPDIQKKLRAEIDRVLGPDHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLNDAKLAGYDIPAESKILVNAWWLANNPAHWKDPQVFRPERFLEEESGVEANGNDFRYIPFGVGRRSCPGIILALPILGITIGRMVQNFELLPP 473          

HSP 2 Score: 50.0618 bits (118), Expect = 7.214e-92
Identity = 24/30 (80.00%), Postives = 25/30 (83.33%), Query Frame = -2
Query:   96 GQCKIDIAEKGGQFSLHILKHSTIVAKPRS 185
            GQ KID +EKGGQFSL IL HSTIV KPRS
Sbjct:  475 GQSKIDTSEKGGQFSLFILNHSTIVLKPRS 504          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: TCMO_PETCR (Trans-cinnamate 4-monooxygenase OS=Petroselinum crispum GN=CYP73A10 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 6.051e-91
Identity = 152/214 (71.03%), Postives = 167/214 (78.04%), Query Frame = -1
Query:  190 ERKTCACSKSMSN*SLKCAIDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 831
            ERK     KS+ N SLKCAIDHI++AQ KGEI EDNVLYIVENINVAAIETTLWSIEWGIAE+VN+PEIQKKL +ELD+V+G G QI E D  KLPYLQAVIKET+R RMAIP+LVPHMNL DAKL GYD+PAESKI+VNAWW+ANNPA W K            ESKVEANGNDF+Y+PFGVGRRSC              GRLVQNFELLPP
Sbjct:  261 ERKKLESIKSVDNNSLKCAIDHIIEAQQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNNPEIQKKLRHELDTVLGAGVQICEPDVQKLPYLQAVIKETLRYRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPAHWNKPDEFRPERFLEEESKVEANGNDFKYIPFGVGRRSCPGIILALPILGIVIGRLVQNFELLPP 474          

HSP 2 Score: 53.9138 bits (128), Expect = 6.051e-91
Identity = 26/30 (86.67%), Postives = 26/30 (86.67%), Query Frame = -2
Query:   96 GQCKIDIAEKGGQFSLHILKHSTIVAKPRS 185
            GQ KID AEKGGQFSL ILKHSTIV KPRS
Sbjct:  476 GQSKIDTAEKGGQFSLQILKHSTIVCKPRS 505          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 6.051e-91
Identity = 150/215 (69.77%), Postives = 164/215 (76.28%), Query Frame = -1
Query:  190 ERKTCACSKSM-SN*SLKCAIDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 831
            ERK    +KS  SN  LKCAIDHILDAQ KGEI +DNVLYIVENINVAAIETTLWSIEWGIAE+VNH +IQ K+  E+D V+G GHQ+TE D HKLPYLQAVIKET+RLRMAIP+LVPHMNL D KL G+D+PAESKI+VNAWW+ NNPA WKK            ES VEANGNDFRYLPFGVGRRSC              GRLVQN ELLPP
Sbjct:  260 ERKKLESTKSTTSNDGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQDIQNKVREEMDRVLGPGHQVTEPDLHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDPKLNGFDIPAESKILVNAWWLPNNPAHWKKPEEFRPERFLEEESHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPP 474          

HSP 2 Score: 59.6918 bits (143), Expect = 6.051e-91
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = -2
Query:   93 GQCKIDIAEKGGQFSLHILKHSTIVAKPRSF 185
            GQ KID +EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  476 GQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: TCMO_ARATH (Trans-cinnamate 4-monooxygenase OS=Arabidopsis thaliana GN=CYP73A5 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 1.030e-90
Identity = 152/214 (71.03%), Postives = 167/214 (78.04%), Query Frame = -1
Query:  190 ERKTCACSKSMSN*SLKCAIDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 831
            ERK  A SK   +  LKCAIDHIL+A+ KGEI EDNVLYIVENINVAAIETTLWSIEWGIAE+VNHPEIQ KL NELD+V+G G Q+TE D HKLPYLQAV+KET+RLRMAIP+LVPHMNL DAKL GYD+PAESKI+VNAWW+ANNP  WKK            ES VEANGNDFRY+PFGVGRRSC              GR+VQNFELLPP
Sbjct:  260 ERKQIASSKPTGSEGLKCAIDHILEAEQKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQSKLRNELDTVLGPGVQVTEPDLHKLPYLQAVVKETLRLRMAIPLLVPHMNLHDAKLAGYDIPAESKILVNAWWLANNPNSWKKPEEFRPERFFEEESHVEANGNDFRYVPFGVGRRSCPGIILALPILGITIGRMVQNFELLPP 473          

HSP 2 Score: 49.6766 bits (117), Expect = 1.030e-90
Identity = 22/30 (73.33%), Postives = 25/30 (83.33%), Query Frame = -2
Query:   96 GQCKIDIAEKGGQFSLHILKHSTIVAKPRS 185
            GQ K+D +EKGGQFSLHIL HS IV KPR+
Sbjct:  475 GQSKVDTSEKGGQFSLHILNHSIIVMKPRN 504          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.718e-33
Identity = 71/199 (35.68%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  178 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPPSWSM 774
            +D +   + + +++ED V+ ++ ++  A ++TT+ S+EW +AE+V +P +QKKL  ELD V+GR   + E D   LPYLQAV+KE++RL    P+++PH    + K+GGYD+P  + ++VN W +A +P  W              E  ++  G+DFR LPFG GRR C              G L+ +FE     WS+
Sbjct:  275 VDALFTLKQQYDLSEDTVIGLLWDMITAGMDTTVISVEWAMAELVRNPRVQKKLQEELDRVVGRDRVMLETDFQNLPYLQAVVKESLRLHPPTPLMLPHKASTNVKIGGYDIPKGANVMVNVWAVARDPKVWSN--PLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFE-----WSL 466          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32
Identity = 68/195 (34.87%), Postives = 109/195 (55.90%), Query Frame = -1
Query:  190 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 774
            +D +L  + + +++ED ++ ++ ++  A ++TT  + EW +AE++ +P +Q+K+  E D V+G    +TE D  +LPYLQ V+KE+ RL    P+++PH +  D K+GGYD+P  S + VN W +A +PA WK             E  V+  G+DFR LPFG GRR C                L+ +F   PP
Sbjct:  272 VDALLTLKDQYDLSEDTIIGLLWDMITAGMDTTAITAEWAMAEMIKNPRVQQKVQEEFDRVVGLDRILTEADFSRLPYLQCVVKESFRLHPPTPLMLPHRSNADVKIGGYDIPKGSNVHVNVWAVARDPAVWKN--PFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTPP 464          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = -1
Query:  190 IDHILDAQTKGEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFELLPP 774
            +D +L  Q K +++ED ++ ++ ++  A ++TT  S+EW +AE++ +P +Q+K+  ELD VIG    +TE D   LPYLQ V KE +RL    P+++PH    + K+GGYD+P  S + VN W +A +PA WK             E  V+  G+DFR LPFG GRR C              G L+ +F   PP
Sbjct:  273 VDALLTLQDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAELIRNPRVQQKVQEELDRVIGLERVMTEADFSNLPYLQCVTKEAMRLHPPTPLMLPHRANANVKVGGYDIPKGSNVHVNVWAVARDPAVWK--DPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTPP 465          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C76A1_SOLME (Cytochrome P450 76A1 (Fragment) OS=Solanum melongena GN=CYP76A1 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.420e-29
Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = -1
Query:  268 KSMSN*SLKCAIDHILDAQTKGE-----ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSC 807
            K   N S+K  +D ++D +  G+     ++ED +  I+  + +A  ETT  S+EW + E++ HP+   K+  E+  VIG   +  E D   LPY+QAV+KE +RL   +P+L+P   +QD K  GYD+P  ++++VNAW I  +P  W              ESKV+  G ++  +PFG GRR C
Sbjct:  228 KGEKNRSIKDLLDVLIDFEGSGKDEPDKLSEDEITVIILEMFLAGTETTSSSVEWALTELLRHPQAMAKVKLEILQVIGPNKKFEECDIDSLPYMQAVLKEQLRLHPPLPLLIPRKAIQDTKFMGYDIPKGTQVLVNAWAIGRDPEYWDN--PFEFKPERFLESKVDVKGQNYELIPFGAGRRMC 410          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: F3PH_ARATH (Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.570e-28
Identity = 63/183 (34.43%), Postives = 94/183 (51.37%), Query Frame = -1
Query:  202 GEITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESK--VEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 744
            G +T+  +  ++ N+  A  +T+  +++W IAE++ HP+I  K   ELD V+GR   + E D  +LPYLQAVIKE  RL    P+ +PH+  +  ++ GY +P  S ++ N W IA +P QW                K  V+  G+DF  +PFG GRR C                LVQ F+
Sbjct:  285 GSLTDTEIKALLLNMFTAGTDTSASTVDWAIAELIRHPDIMVKAQEELDIVVGRDRPVNESDIAQLPYLQAVIKENFRLHPPTPLSLPHIASESCEINGYHIPKGSTLLTNIWAIARDPDQWSDPLAFKPERFLPGGEKSGVDVKGSDFELIPFGAGRRICAGLSLGLRTIQFLTATLVQGFD 467          
BLAST of CF832404 vs. ExPASy Swiss-Prot
Match: C71A8_MENPI (Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8 PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.330e-27
Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = -1
Query:  202 ITEDNVLYIVENINVAAIETTLWSIEWGIAEIVNHPEIQKKLCNELDSVIGRGHQITELDTHKLPYLQAVIKETIRLRMAIPILVPHMNLQDAKLGGYDVPAESKIIVNAWWIANNPAQWKKXXXXXXXXXXXXESKVEANGNDFRYLPFGVGRRSCXXXXXXXXXXXXXXGRLVQNFE 738
            I  D++  I+ ++  A  +TT   +EW + E++ HPEI KKL +E+  V+   H IT+ D  K+ YL+AV+KET+R    IP+LVP +   D ++ GYDVP  + +++NAW I  +P  W +             S V+  G DF  +PFG GRR C                L+Q F+
Sbjct:  293 IDRDSIKAIILDVFAAGTDTTAVVLEWAMTELLRHPEIMKKLQSEVRQVVKDKHNITDDDIEKMHYLKAVMKETMRFHTPIPLLVPRVARNDVEVMGYDVPVGTMVMINAWAIGRDPTSWDE--PEKFRPERFLNSSVDFKGLDFELIPFGAGRRGCPGTTFPMATLEFTLANLMQKFD 469          
The following BLAST results are available for this feature:
BLAST of CF832404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
TCMO_RUTGR7.214e-9271.50Trans-cinnamate 4-monooxygenase OS=Ruta graveolens... [more]
TCMO_PETCR6.051e-9171.03Trans-cinnamate 4-monooxygenase OS=Petroselinum cr... [more]
TCMO_MEDSA6.051e-9169.77Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_ARATH1.030e-9071.03Trans-cinnamate 4-monooxygenase OS=Arabidopsis tha... [more]
C98A1_SORBI4.718e-3335.68Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C98A3_ARATH2.341e-3234.87Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN2.341e-3237.44Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C76A1_SOLME1.420e-2935.68Cytochrome P450 76A1 (Fragment) OS=Solanum melonge... [more]
F3PH_ARATH1.570e-2834.43Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana... [more]
C71A8_MENPI1.330e-2735.20Cytochrome P450 71A8 OS=Mentha piperita GN=CYP71A8... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01M23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01M23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832404 ID=CF832404; Name=CF832404; organism=Citrus sinensis; type=EST; length=831bp
CCACTGCCACTTGATTTGATCCGACATTGAAGAAACCATTCAACCACTTT
GAAACAGACTTAACATTACAACCAAATGGAATTGTGAAACTAGAATGATC
TAGGCTTGGCAACAATGGTCGAGTGCTTCAAAATGTGCAAACTGAACTGC
CCACCTTTCTCTGCAATGTCAATCTTACATTGACCATGAAGGAGGCAAGA
GCTCAAAGTTCTGTACCAAACGCCCAATAATGATACCAAGAATTGGCAAA
GCAAGGATAATTCCAGGGCAGCTTCTTCTCCCAACACCGAAAGGAAGGTA
ACGGAAATCATTTCCATTAGCCTCAACCTTGGACTCCTCCTCCAAAAACC
TCTCAGGCCTGAATTCTTCAGGTTTCTTCCATTGGGCGGGATTGTTGGCG
ATCCACCACGCGTTCACTATGATTTTGCTCTCAGCAGGGACGTCATATCC
TCCAAGCTTGGCGTCCTGAAGGTTCATGTGCGGCACAAGAATAGGAATTG
CCATCCTAAGGCGAATAGTTTCCTTGATCACGGCCTGAAGGTAGGGTAGT
TTGTGGGTGTCAAGCTCAGTGATTTGATGACCACGACCAATCACGGAGTC
AAGTTCATTGCAGAGCTTCTTCTGGATTTCAGGATGATTCACTATCTCTG
CAATTCCCCACTCTATCGACCAAAGAGTTGTCTCTATCGCGGCAACATTG
ATGTTCTCAACGATGTATAGAACGTTGTCCTCGGTGATTTCTCCCTTTGT
CTGAGCGTCCAAAATATGATCGATTGCGCATTTCAAGCTTTAATTACTCA
TGCTCTTCGAGCATGCGCATGTCTTTCTCTC
back to top