CF832411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 47/174 (27.01%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K +++ GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ L R + +G EG W++ I Sbjct: 24 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 47/174 (27.01%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K +++ GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG + R +W++Y G++F+VD D +R++E+++EL ++ ++ + + +L+ NK D P A++ + + GL+ L R + +G EG W++ I Sbjct: 24 KTGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGLYGQTTGKGNVSLKELNARPLEVFMCSVLKRQGYGEGFRWMAQYI 197
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.313e-17 Identity = 56/176 (31.82%), Postives = 87/176 (49.43%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE +IL GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL ++R ++ S G G EG WLS I Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVDLVGSNVRPLEVFMCSIVRKMGYG--EGFKWLSQYI 192
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17 Identity = 48/174 (27.59%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K +++ GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS I Sbjct: 24 KSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1A_BOVIN (GTP-binding protein SAR1a OS=Bos taurus GN=SAR1A PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.714e-17 Identity = 48/174 (27.59%), Postives = 91/174 (52.30%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K +++ GLD AGKTT+L+ LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS I Sbjct: 24 KSGKLVFLGLDNAGKTTLLHMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 56/176 (31.82%), Postives = 84/176 (47.73%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSG--------------EGLYEGLDWLSNNI 487 KE +IL GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L++D L L+ NK D P A + E+ LGL + + + SG G EG WLS I Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILGNKIDNPYAASEDELRYHLGLTNFTTGKGKVTTAGGDSGVRPLEVFMCSIVRKMGYGEGFKWLSQYI 194
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.239e-17 Identity = 46/130 (35.38%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 391 KE +IL GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAASEDELRYHLGL 148
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.924e-17 Identity = 56/176 (31.82%), Postives = 86/176 (48.86%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL--------------HSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 KE +IL GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VD+ D++R E++ EL +L+++ L L+ NK D+P A + E+ LGL +R ++ S G G EG WLS I Sbjct: 19 KEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVTLGDSGVRPLEVFMCSIVRKMGYG--EGFKWLSQYI 192
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: ARL10_HUMAN (ADP-ribosylation factor-like protein 10 OS=Homo sapiens GN=ARL10 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.819e-17 Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL 400 ++ +L+ GLD AGK+T L L + IPT GFN + K+ + ++GG +R W+ + L+FVVDS DR R+ AR ELH++L++D D ++V ANKQDL AM+ E+ +LGL ++ Sbjct: 76 EQREVLVLGLDGAGKSTFLRVLSGKPPLEGHIPTWGFNSVRLPTKDFEVDLLEIGGSQNLRFYWKEFVSEVDVLVFVVDSADRLRLPWARQELHKLLDKDP--DLPVVVVANKQDLSEAMSMGELQRELGLQAI 207
BLAST of CF832411 vs. ExPASy Swiss-Prot
Match: SAR1A_MOUSE (GTP-binding protein SAR1a OS=Mus musculus GN=Sar1a PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.988e-17 Identity = 48/174 (27.59%), Postives = 90/174 (51.72%), Query Frame = 2 Query: 2 KEMRILMEGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH------------SLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 487 K +++ GLD AGKTT+L LK + +PT+ E + ++FT +D+GG ++ R +W++Y G++F+VD D R++E++ EL+ ++ ++ + + +L+ NK D +A++ ++ + GL+ L R + +G EG WLS I Sbjct: 24 KSGKLVFLGLDNAGKTTLLQMLKDDRLGQHVPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIKGLYGQTTGKGNVTLKELNARPMEVFMCSVLKRQGYGEGFRWLSQYI 197 The following BLAST results are available for this feature:
BLAST of CF832411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832411 ID=CF832411; Name=CF832411; organism=Citrus sinensis; type=EST; length=733bpback to top |