CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.079e-32
Identity = 80/224 (35.71%), Postives = 116/224 (51.79%), Query Frame = 3
Query:   57 AVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGS-------------SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            A++ +KDQ  C  CW+ +A G +E    +S  + V +S Q+L+DC         G C  GC+GG +  AF  +L   G+  EKDYP+ G      C   K +  A + +F ++ ++E ++A  L  +GP+ V IN   +Q Y  GV  + P  C   L DH VL+VG+GS             S   P      PYWI+KNSWG  WGE GY+++  G N CG+
Sbjct:  140 AISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI 354          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 2.403e-32
Identity = 77/223 (34.53%), Postives = 112/223 (50.22%), Query Frame = 3
Query:   54 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGSS-----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            G ++ VK Q +C  CW+ +A G +E    +   + V LS Q+L+DC         G C  GC GG +  AF  +L   G+  EKDYP+ G      C   K    A + +F ++  +E ++A  L   GP+ V IN   ++ Y  GV  + P  C  +L DH VL+VG+G S           G  P   +  P+WI+KNSWG  WG  GY+++  G N CG+
Sbjct:  139 GVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.139e-32
Identity = 79/175 (45.14%), Postives = 107/175 (61.14%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG--ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGS 554
            R  GAVT +K+QG CG CWSFSATGA EGA +++ G  +L S+SEQQL+DC        YG  ++GC GGLM  AFEYI+  GG++ E  YP+T  +   CK++ S I A +S++  ++S  +   A  V  GP +V I+A     Q Y  G+ + P      LDHGVL VG+GS
Sbjct:  119 RAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCS-----GSYG--NNGCEGGLMTLAFEYIINNGGIDTESSYPFT-ANTEKCKYNPSNIGAELSSYVNVTSGSESDLAAKVTQGPTSVAIDASQPSFQFYSSGIYNEPACSSTQLDHGVLAVGFGS 285          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.100e-32
Identity = 78/214 (36.45%), Postives = 115/214 (53.74%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM--GRNVCGV 677
            R  GAVT VK+QG+CGSCW+FS    +E  + + TG L+SLSEQ+LVDCD +         + GC GG    A++YI+  GG++ + +YPY     G C+     ++    N     ++     A  V+   +A+  ++   Q Y  G+ S P  CG  L+HGV IVGY ++           YWI++NSWG  WGE GY ++    G  +CG+
Sbjct:    8 RKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAVQ-GPCQAASKVVSIDGYNGVPFCNEXALKQAVAVQPSTVAIDASSAQFQQYSSGIFSGP--CGTKLNHGVTIVGYQAN-----------YWIVRNSWGRYWGEKGYIRMLRVGGCGLCGI 198          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVBS (Viral cathepsin OS=Buzura suppressaria nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.993e-32
Identity = 70/223 (31.39%), Postives = 123/223 (55.16%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGG-SCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            R    VT +K+Q ACG+CW+F+   ++E  + +     + LSEQQ++DCD+          D GC+GGL+++AFE +++ G + +E +YPY G +     + D++ +      +  +   E+++   L   GP+ + I+A  +  Y  G+   + C  Y L+H VL+VGYG            P+W  KN+WG++WGE GY+++    + CG+ + ++S A I
Sbjct:  123 RQQNKVTSIKNQKACGACWAFATLASIESQYAIKNNVHIDLSEQQMIDCDY---------VDMGCDGGLLHTAFEQMIQMGELVQEHEYPYAGVNKPCELRGDETGVVKVKGCYRYVVFREEKLKDLLRAVGPIPMAIDASGIVNYHHGII--HYCENYGLNHAVLLVGYGVE-------NNVPFWTFKNTWGKDWGEEGYFRVRQNVDACGMTNELASSAVI 327          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.193e-31
Identity = 77/218 (35.32%), Postives = 118/218 (54.13%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI----CMGRNVCGV 677
            RD+GAV  VK+QG CG CW+F+A   +EG + +  G LV LSEQ+++DC          +   GC GG +N A+++I+   GV  +++YPY     G+C  +    +A ++ +S +  +++      V + P+A  I+A     Q Y GGV S P  CG  L+H + I+GYG             YWI++NSWG +WG+ GY +I         VCG+
Sbjct:    9 RDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQ-GTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGP--CGFSLNHAITIIGYGRDS----------YWIVRNSWGSSWGQGGYVRIRRDVSHSGGVCGI 203          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 2.657e-31
Identity = 75/205 (36.59%), Postives = 113/205 (55.12%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLDHGVLIVGYG--SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            RD GAVT VK+QG CGSCW+F++   +E  + +  G LVSLSEQQ++DC          +   GC GG +N A+ +I+   GV     YPY     G+CK +    +A ++ ++ +  + ++     V + P+A  ++A    Q Y  GV     CG  L+H ++I+GYG  SSG        K +WI++NSWG  WGE GY ++
Sbjct:  130 RDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK-GTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTG-PCGTRLNHAIVIIGYGQDSSG--------KKFWIVRNSWGAGWGEGGYIRL 314          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 1.010e-30
Identity = 78/215 (36.28%), Postives = 110/215 (51.16%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 677
            +  G VT V+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC            + GC  G    A  Y+++ GG+E E  YPY   D GSC++      A ++ F  +  +ED +   +   GP++V I+A       Y  G+     C    + H +L+VGYG +G        + YW++KNS G  WG  GY KI   + N CG+
Sbjct:  121 KKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRP-------QGNWGCYLGNTYLALHYVMENGGLESEATYPYEEKD-GSCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDARHASFLFYKRGIYYEPNCSSCVVTHSMLLVGYGFTG---RESDGRKYWLVKNSMGTQWGNKGYMKISRDKGNHCGI 324          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 77/233 (33.05%), Postives = 118/233 (50.64%), Query Frame = 3
Query:   12 LPTIFL-LTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAG-GVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS--SDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSV 698
            +P + L L    RD   V  V++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  ++ +    +  +  YP+   +G    F +S+   +V +FS  +    ED+MA  L+  GPL V ++A+  Q Y+GG+   +      +H VLI G+  +G         PYW+++NSWG +WG  GY  + MG NVCG+   V++V
Sbjct:   94 IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVNGQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVLITGFDRTG-------NTPYWMVRNSWGSSWGVEGYAHVKMGGNVCGIADSVAAV 310          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.319e-30
Identity = 83/220 (37.73%), Postives = 117/220 (53.18%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R  GAVT V++QG CGSC++F+   ALE  H   TG L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT+   C++ +S      + F+ I   DE  +   + K GP+ VGI+      + Y  GV     CG+  DH VL VGYG+            YWI+KNSWG +WG++GY  +   R N+C + S  S
Sbjct:  189 RTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTE-QRCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGR-PDHAVLAVGYGTHP------SYGDYWIVKNSWGTDWGKDGYVYMARNRGNMCHIASAAS 392          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATW_HUMAN1.079e-3235.71Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATW_FELCA2.403e-3234.53Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CYSP6_DICDI3.139e-3245.14Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
ERVC_TABDI4.100e-3236.45Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATV_NPVBS6.993e-3231.39Viral cathepsin OS=Buzura suppressaria nuclear pol... [more]
MDO1_PSEMR1.193e-3135.32Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
ANAN_ANACO2.657e-3136.59Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CATM_MOUSE1.010e-3036.28Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATO_MOUSE1.319e-3033.05Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATL_BRUPA1.319e-3037.73Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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