CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.250e-30
Identity = 81/203 (39.90%), Postives = 111/203 (54.68%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            VK+QG+CGSCW+FSA GALE    +   +   LSEQ LVDC    D E       GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F+ I S ++   A  ++   ++V ++A   Q Y  GV     C K L+HGV++VG  + G           W I+NSWG +WGE G+ ++  G + CG+
Sbjct:  126 VKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFTDIDSCDE--LAQAIQERTVSVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADG----------AWKIRNSWGSSWGEAGHIRLA-GGDTCGI 304          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.938e-30
Identity = 81/203 (39.90%), Postives = 109/203 (53.69%), Query Frame = 3
Query:   69 VKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            VK+QG+CGSCW+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+    G+   KDYPYT  D G+CK    +    V  F  I S ++   A  ++   +AV ++A   Q Y  GV     C K L+HGV++VG  + G           W I+NSWG +WGE G+ ++  G + CG+
Sbjct:  126 VKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYVAD-NGLAEAKDYPYTAKD-GTCKTSVKRPYTHVQGFKDIDSCDE--LAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKNLNHGVVLVGVQADG----------AWKIRNSWGSSWGEAGHIRLA-GGDTCGI 304          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 6.545e-30
Identity = 76/217 (35.02%), Postives = 114/217 (52.53%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI--CMGRN--VCGV 677
            R+ GAVT VK+Q  CGSCW+FS    +EG + + TG+L+SLSEQ+L+DC++            GC+GG    + +Y++   GV  E++YPY    G     DK      ++ +  + ++++      + + P++V  ++     Q Y GG+     CG   DH V  VGYG           K Y ++KNSWG NWGE GY +I    GR+   CGV
Sbjct:    8 REKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYEKKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGI-YEGPCGTNTDHAVTAVGYG-----------KTYLLLKNSWGPNWGEKGYIRIKRASGRSKGTCGV 202          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: MEX2_JACME (Chymomexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.458e-29
Identity = 78/218 (35.78%), Postives = 110/218 (50.46%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAV--GINAVWMQTYIGGV-SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI--CMGRN--VCGV 677
            RD GAVT VK+Q  CGSCW+FS    +EG + + TG+L+SLSEQ+L+DCD             GC GG    + +Y+   GGV  EK+YPY    G     +K      ++ +  + ++++      + + P++V         Q Y GG+ + P  CG   DH V  +GYG           K   + KNSWG NWGE GY KI    G++   CGV
Sbjct:    8 RDKGAVTPVKNQNPCGSCWAFSTVATVEGINKIRTGKLISLSEQELLDCDRR---------SHGCKGGYQTGSIQYVADNGGVHTEKEYPYEKKQGKCRAKEKKGTKVQITGYKRVPANDEISLIQGIGNQPVSVLHESKGRAFQLYKGGIFNGP--CGYKNDHAVTAIGYG-----------KAQLLDKNSWGPNWGEKGYIKIKRASGKSEGTCGV 203          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 2.487e-29
Identity = 77/207 (37.20%), Postives = 110/207 (53.14%), Query Frame = 3
Query:   72 KDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGV 677
            KDQG CGSCW+F  T  LEG      G+L S SEQQLVDCD         + D+GC GG  +++ ++I +  G+  E DYPY     G+CK  K+ +A    +  V    E  +   + ++GP+AVG++A     Q Y  G   S      + ++H V  VGYGS+           YWII+NSWG +WG+ GY+ +     N+CG+
Sbjct:  107 KDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV-AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDASRPSFQLYKKGTIYSDTKCRSRMMNHCVTAVGYGSN-------SNGKYWIIRNSWGTSWGDAGYFLLARDSNNMCGI 295          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 128.642 bits (322), Expect = 4.242e-29
Identity = 82/217 (37.79%), Postives = 107/217 (49.31%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM----GRNVCGV 677
            R  GAVT VK+QGACGSCW+FS    +EG + + TG L+ LSEQ+LVDCD             GC GG   ++ +Y+    GV   K YPY          DK      ++ +  + S+ +      + + PL+V + A     Q Y  GV     CG  LDH V  VGYG+S         K Y IIKNSWG NWGE GY ++       +  CGV
Sbjct:  142 RAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQAKQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGV-FDGPCGTKLDHAVTAVGYGTS-------DGKNYIIIKNSWGPNWGEKGYMRLKRQSGNSQGTCGV 340          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 7.236e-29
Identity = 80/218 (36.70%), Postives = 110/218 (50.46%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGV 677
            R  GAVT VK QG C SCW+FS    +EG + + TG LV LSEQ+LVDCD +           GCN G  +++ +Y+ +  G+     YPY      +C+ ++       +N    + S+ +    N + H P++V + +     Q Y GG+     CG  +DH V  VGYG SG        K Y +IKNSWG  WGENGY +I         VCGV
Sbjct:  140 RAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQ-NGIHLRAKYPYIAKQ-QTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGI-FEGSCGTKVDHAVTAVGYGKSG-------GKGYILIKNSWGPGWGENGYIRIRRASGNSPGVCGV 338          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.451e-29
Identity = 80/219 (36.53%), Postives = 113/219 (51.60%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            R  G VT ++DQG CGSC++F +  ALEG   +  G   E + LSE+ +V C  E         ++GCNGGL ++ + YI++  G+ +E DYPYTG+D  +C+ D    A   S   V  ++E ++ A  +  G + V I+A  V  Q Y  G      C      L+H V  VGYG           K  WI++NSWG  WGE GY  + +  N CGV
Sbjct:  101 RKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTRE-------DGNNGCNGGLGSNVYNYIME-NGIAKESDYPYTGSDS-TCRSDVKAFAKIKSYNRVARNNEVELKA-AISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEVCAVGYGV-------VDGKECWIVRNSWGTGWGEKGYINMVIEGNTCGV 302          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.591e-28
Identity = 76/204 (37.25%), Postives = 99/204 (48.53%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            R  GAVT V+ QG+CGSCW+FSA   +EG + + TG+LV LSEQ+LVDC+             GC GG    A EY+ K  G+     YPY    G              S    +  + +    N +   P++V + +     Q Y GG+     CG  +DH V  VGYG SG        K Y +IKNSWG  WGE GY +I
Sbjct:  140 RKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAK-NGIHLRSKYPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNLLNAIAKQPVSVVVESKGRPFQLYKGGI-FEGPCGTKVDHAVTAVGYGKSG-------GKGYILIKNSWGTAWGEKGYIRI 325          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27
Identity = 78/217 (35.94%), Postives = 103/217 (47.47%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR----NVCGV 677
            R  GAVT VK+QG+CGSCW+FSA   +EG   + TG L   SEQ+L+DCD             GCNGG   SA + + +  G+     YPY G        +K   AA       +    +      + + P++V + A     Q Y GG+     CG  +DH V  VGYG +           Y +IKNSWG  WGENGY +I  G      VCG+
Sbjct:  141 RQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVG-PCGNKVDHAVAAVGYGPN-----------YILIKNSWGTGWGENGYIRIKRGTGNSYGVCGL 335          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATL2_PARTE2.250e-3039.90Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATL1_PARTE2.938e-3039.90Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
MEX1_JACME6.545e-3035.02Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
MEX2_JACME1.458e-2935.78Chymomexicain OS=Jacaratia mexicana PE=1 SV=1[more]
ACP1_ENTHI2.487e-2937.20Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
PAPA2_CARPA4.242e-2937.79Chymopapain OS=Carica papaya PE=1 SV=2[more]
PAPA4_CARPA7.236e-2936.70Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CPP1_ENTHI9.451e-2936.53Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
PAPA3_CARPA3.591e-2837.25Caricain OS=Carica papaya PE=1 SV=2[more]
PAPA1_CARPA3.971e-2735.94Papain OS=Carica papaya PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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