CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.737e-44
Identity = 93/219 (42.47%), Postives = 131/219 (59.82%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGV 677
            R  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K GG++ +KDYPY G DG   +  K+     + ++  + +  ++     V H P+++ I A     Q Y  G+     CG  LDHGV+ VGYG+          K YWI++NSWG++WGE+GY +  M RN+      CG+
Sbjct:  144 RKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQLYDSGI-FDGSCGTQLDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLR--MARNIASSSGKCGI 344          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.669e-44
Identity = 101/217 (46.54%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDS 683
            R    VT VKDQ  CGSCW+FSATGALEG HFL   ELVSLSEQQLVDC       +YG  + GC GG M SAF+YI   GG++ E  YPY   D  SC+FD + I A  +    +   E+ +   +   GP++V I+A     Q Y  GV     C   +LDHGVL VGYG+          K YW++KNSWG +WG+ GY K+   R N CG+ S
Sbjct:  113 RTKALVTPVKDQEQCGSCWAFSATGALEGQHFLKNDELVSLSEQQLVDCS-----TDYG--NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAED-RSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTE-------STKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIAS 314          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.098e-44
Identity = 101/221 (45.70%), Postives = 128/221 (57.92%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VKDQG CGSCW+FS TGALEG HF + G+LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y+   GG++ E+ YPYT  D   C++     AA  + F  I    ++     V   GP++V I+A     Q Y  G+   P    + LDHGVL+VGYG  G        K YWI+KNSWGE WG+ GY  +   R N CG+ +  S
Sbjct:    8 REKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSR---PEG----NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG-------GKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 214          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.040e-43
Identity = 100/223 (44.84%), Postives = 132/223 (59.19%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 695
            R+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPLA+ ++A     Y GG+  SC     K LDHGVL+VGY  +          PYWIIKNSW   WGE+GY +I  G N C ++  VSS
Sbjct:  133 REKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDAESFMDYNGGILTSC---TSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEKGTNQCLMNQAVSS 336          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.317e-43
Identity = 98/220 (44.55%), Postives = 126/220 (57.27%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+   GG++ E+ YPY G +  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  121 REKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNSSKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGISTAAS 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP_TRYCR (Cruzipain OS=Trypanosoma cruzi PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 3.026e-43
Identity = 101/221 (45.70%), Postives = 124/221 (56.11%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGS--CKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSS 695
            R  GAVT VKDQG CGSCW+FSA G +E   FL+   L +LSEQ LV CD           DSGC+GGLMN+AFE+I++   G V  E  YPY   +G S  C      + A ++    +  DE Q+AA L  +GP+AV ++A    TY GGV    +  + LDHGVL+VGY  S          PYWIIKNSW   WGE GY +I  G N C V    SS
Sbjct:  130 RARGAVTAVKDQGQCGSCWAFSAIGNVECQWFLAGHPLTNLSEQMLVSCD---------KTDSGCSGGLMNNAFEWIVQENNGAVYTEDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWMTYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIAKGSNQCLVKEEASS 333          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 3.026e-43
Identity = 99/217 (45.62%), Postives = 124/217 (57.14%), Query Frame = 3
Query:   54 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  124 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.742e-43
Identity = 95/220 (43.18%), Postives = 131/220 (59.55%), Query Frame = 3
Query:   27 LLTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 671
            ++++  RD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C
Sbjct:  130 VMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.742e-43
Identity = 95/220 (43.18%), Postives = 131/220 (59.55%), Query Frame = 3
Query:   27 LLTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDGGSCK---FDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVC 671
            ++++  RD GAVT VK+QG CGSCW+FSA G +EG    S   LVSLSEQ LV CD         + D GCNGGLM+ A  +I+++  G V  E  YPY  T GG  +    D+ ++ A ++ F  +  DE+++A  + K GP+AV ++A   Q Y GGV    +    L+HGVLIVG+  +        + PYWI+KNSWG +WGE GY ++ MG N C
Sbjct:  130 VMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGNIEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPY--TSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVSLCLAWS-LNHGVLIVGFNKNA-------KPPYWIVKNSWGSSWGEKGYIRLAMGSNQC 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.502e-42
Identity = 97/220 (44.09%), Postives = 125/220 (56.82%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF Y+   GG++ E+ YPY G D  +C +     AA  + F  +   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  121 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEG----TDSNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 329          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
RD21A_ARATH2.737e-4442.47Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSP3_HOMAM4.669e-4446.54Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATL1_CHICK6.098e-4445.70Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CYSP_TRYBB1.040e-4344.84Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CATL1_PIG2.317e-4344.55Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CYSP_TRYCR3.026e-4345.70Cruzipain OS=Trypanosoma cruzi PE=1 SV=1[more]
CATL1_BOVIN3.026e-4345.62Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
LMCPA_LEIME6.742e-4343.18Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP1_LEIPI6.742e-4343.18Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATL1_CANFA1.502e-4244.09Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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