CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.502e-42
Identity = 99/218 (45.41%), Postives = 131/218 (60.09%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            R+ G V+ VK+QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    +       + GC+GGL + AFEYI   GG++ E+ YPYTG DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV     CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+N+CGV
Sbjct:  148 REDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.962e-42
Identity = 96/232 (41.38%), Postives = 125/232 (53.88%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAP------------IRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R  GAVT VK+QG CG CWSFS TG+ EGAHF S GELVSLSEQ L+DC  E         +SGC+GGLM  AFEYI+   G++ E  YPY   + G C++      A +S++  +++  +    + V   P++V I+A     Q Y  G+   P    + LDHGVL VGYGS   +                    YWI+KNSWG +WG  GY  +   R N CG+ S  S
Sbjct:  119 RSEGAVTPVKNQGQCGGCWSFSTTGSTEGAHFQSKGELVSLSEQNLIDCSTE---------NSGCDGGLMTYAFEYIINNNGIDTESSYPYK-AENGKCEYKSENSGATLSSYKTVTAGSESSLESAVNVNPVSVAIDASHQSFQLYTSGIYYEPECSSENLDHGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSAS 340          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.962e-42
Identity = 96/224 (42.86%), Postives = 128/224 (57.14%), Query Frame = 3
Query:   30 LTLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGV 677
            +T+  R  GAV  +KDQG CGSCW+FS   A+EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY GT+G      K+     +  +  + S ++      V + P++V I+A     Q Y  G+     CG  +DH V+ VGYGS            YWI++NSWG  WGE+GY  I M RNV      CG+
Sbjct:  102 VTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK-CGTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGY--IRMERNVASKSGKCGI 307          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.346e-42
Identity = 98/217 (45.16%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   54 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI   G ++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+   + N CG+ +  S
Sbjct:  124 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNNNKFWIVKNSWGPEWGWNGYVKMAKDQNNHCGIATAAS 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 96/223 (43.05%), Postives = 131/223 (58.74%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            R+ G V+ VKDQG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ EK YPYTG D  +CKF    +   V    N ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S
Sbjct:  148 REDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKD-ETCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.454e-42
Identity = 102/231 (44.16%), Postives = 130/231 (56.28%), Query Frame = 3
Query:    3 PSSLPTIFLLT-LTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 677
            P S PT  +   +  R+ GAVT VKDQG CGSCW+FSA  ALEGAHFL TG+LVSLSEQ LVDC        YG  + GCNGG    A++YI+   G++ E  YPY   D  +C++D   I A VS++    S DE  +   +   GP++V I+A      +Y GGV     C   Y +H V  VGYG+            YWI+KNSWG  WGE+GY K+   R N C +
Sbjct:   98 PKSAPTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDCS-----SSYG--NQGCNGGWPYQAYQYIIANRGIDTESSYPYKAID-DNCRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQSSFGSYGGGVYYEPNCDSWYANHAVTAVGYGTDA------NGGDYWIVKNSWGAWWGESGYIKMARNRDNNCAI 314          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 9.735e-42
Identity = 94/225 (41.78%), Postives = 126/225 (56.00%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVA 701
            T+  R  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+K GG+  EKDYPY G  G    F K+    ++  +  + + ++      + + P++V I A     Q Y  G+     CG  LDH V+ VGYGS            YWI++NSWG  WGE GY  I M RN+    S    +A
Sbjct:  148 TVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTG-SCGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGY--IRMERNLAASKSGKCGIA 354          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 9.735e-42
Identity = 98/220 (44.55%), Postives = 127/220 (57.73%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA---VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 692
            R+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y+   GG++ E+ YPY  T+  SCK++     A  + F  I   E  +   +   GP++V I+A    +M    G    P    + +DHGVL+VGY   GF         YW++KNSWGE WG  GY K+    RN CG+ S  S
Sbjct:  121 REKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQG----NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE-ESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGGYIKMAKDRRNHCGIASAAS 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.271e-41
Identity = 96/224 (42.86%), Postives = 131/224 (58.48%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 692
            T+  R+ G VT VK QG+CG+CW+FSA GALEG   L TG+L+SLS Q LVDC +E   E+YG  + GC GG M  AF+YI+  GG+E +  YPY  TD   C ++    AA  S +  +   DED +   +   GP++VGI+A       Y  GV     C   ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++    +N CG+ S  S
Sbjct:  126 TVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNE---EKYG--NKGCGGGYMTEAFQYIIDNGGIEADASYPYKATD-EKCHYNSKNRAATCSRYIQLPFGDEDALKEAVATKGPVSVGIDASHSSFFFYKSGVYDDPSCTGNVNHGVLVVGYGT-------LDGKDYWLVKNSWGLNFGDQGYIRMARNNKNHCGIASYCS 336          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.833e-41
Identity = 90/208 (43.27%), Postives = 125/208 (60.10%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            VT VK+QG CGSCW+F+A G +E  + +    L+ LSEQQL+DCD           D GC+GGLM+ AF+ I++ GGVE E DYPY G +  +C+   SK+A  +S+ +     DE ++   L K+GP+AV I+ V +  Y  G++   +C    L+H VL+VGYG          + PYWI KNSWG NWGENGY++     N CG+
Sbjct:  138 VTKVKEQGVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIE-YACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIE-------NDTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
ALEUL_ARATH1.502e-4245.41Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CYSP5_DICDI1.962e-4241.38Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]
CYSP4_BRANA1.962e-4242.86Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CATL2_BOVIN3.346e-4245.16Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
ALEU_ARATH5.707e-4243.05Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
CRUST_PANBO7.454e-4244.16Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
GCP1_ARATH9.735e-4241.78Germination-specific cysteine protease 1 OS=Arabid... [more]
CATL1_CERAE9.735e-4244.55Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATS_MOUSE1.271e-4142.86Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CATV_NPVST2.833e-4143.27Viral cathepsin OS=Spodoptera litura multicapsid n... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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