CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_CANFA (Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 93/220 (42.27%), Postives = 128/220 (58.18%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVD    C  E+YG  + GCNGG M +AF+YI+   G++ E  YPY   + G C++D  K AA  S ++ +    ED +   +   GP++V I+A       Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG N+G+ GY ++     N CG+ S  S
Sbjct:  122 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNNGIDSEASYPYKAMN-GKCRYDSKKRAATCSKYTELPFGSEDALKEAVANKGPVSVAIDASHYSFFLYRSGVYYEPSCTQNVNHGVLVVGYGN-------LNGKDYWLVKNSWGLNFGDQGYIRMARNSGNHCGIASYPS 327          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.406e-40
Identity = 97/217 (44.70%), Postives = 123/217 (56.68%), Query Frame = 3
Query:   54 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVD             + GCNGGLM++AF+YI + GG++ E+ YPY  TD  SC +     AA  + F  I   E  +   +   GP++V I+A     Q Y  G+   P    K LDHGVL+VGYG  G          +WI+KNSWG  WG  GY K+   + N CG+ +  S
Sbjct:   11 GYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYIKENGGLDSEESYPYEATD-TSCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG------TNNKFWIVKNSWGPEWGNKGYVKMAKDQNNHCGIATAAS 213          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATL2_HUMAN (Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.836e-40
Identity = 95/221 (42.99%), Postives = 124/221 (56.11%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINA--VWMQTYIGGVSC-PYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R  G VT VK+Q  CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGG M  AF+Y+ + GG++ E+ YPY   D   CK+      A  + F+V++  +++     V   GP++V ++A     Q Y  G+   P    K LDHGVL+VGYG  G          YW++KNSWG  WG NGY KI   + N CG+ +  S
Sbjct:  121 RKKGYVTPVKNQKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVD-EICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEG---ANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATAAS 330          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.398e-40
Identity = 85/219 (38.81%), Postives = 131/219 (59.82%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E +++ GGV+ E DYPY G+D G+C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+     C  Y  +H VL+VGYG            PYWI+KN+WGE+WGE GY+++    N CG+ + + + A I+
Sbjct:  125 VTSVKNQGICGACWAFATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQMGGVQAENDYPYEGSD-GNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGIM--RYCSNYGFNHAVLLVGYGVE-------NNVPYWILKNTWGEDWGEQGYFRVQQNINACGIRNELLASAEIY 324          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 3.132e-40
Identity = 90/219 (41.10%), Postives = 126/219 (57.53%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGV 677
            R  GAV  +KDQG CGSCW+FSA  A+EG + + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+  GG++ E DYPY G D       K+     + ++  ++ + +      V + P++V I A     Q Y  G+     CG  LDHGV  VGYG+          K YWI++NSWG++WGE+GY +  M RN+      CG+
Sbjct:  136 RTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCD--------TSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKVVTIDSYEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTGK-CGTALDHGVAAVGYGTE-------NGKDYWIVRNSWGKSWGESGYVR--MERNIKASSGKCGI 336          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.342e-40
Identity = 89/213 (41.78%), Postives = 125/213 (58.69%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 677
            RD   VT +KDQG CGSCW+F A G +E  + +   +L+ LSEQQL+DCD           D GCNGGLM+ AF+ +L  GGVE E DYPY G++   C  D  KIA  +++ F     DE+++   +   GP+A+ ++A+ +  Y  G+     C  Y L+H VL++G+G            PYWIIKNSWGE+WGENG+ ++    N CG+
Sbjct:  163 RDTNKVTPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCNGGLMHLAFQELLLMGGVETEADYPYQGSE-QMCTLDNRKIAVKLNSCFKYDIRDENKLKELVYTTGPVAIAVDAMDIINYRRGILNQ--CHIYDLNHAVLLIGWGIE-------NNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.977e-40
Identity = 94/221 (42.53%), Postives = 129/221 (58.37%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAA-AVSNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            R  G V+ VK QG CGSCW+FS TGALE A+  + G+ +SLSEQQLVDC    +       + GCNGGL + AFEYI   GG++ E+ YPYTG + G CKF ++ I    +S+ ++    E ++   +    P++V    V   + Y  GV     CG     ++H VL VGYG            PYW+IKNSWG +WGE+GY+K+ MG+N+CGV +  S
Sbjct:  146 RKDGIVSPVKAQGKCGSCWTFSTTGALEAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKN-GICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQYKSGVYASTECGDTPMDVNHAVLAVGYGVE-------NGTPYWLIKNSWGADWGEDGYFKMEMGKNMCGVATCAS 351          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.977e-40
Identity = 95/223 (42.60%), Postives = 128/223 (57.40%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV---SNFSVISSDEDQMAANLVKHGPLAVGINAV-WMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            R+ G V+ VK+Q  CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC         G  + GCNGGL + AFEYI   GG++ E+ YPY G + G C +     A  V    N ++ + DE + A  LV+  P++V    +   + Y  GV     CG   D   H VL VGYG            PYW+IKNSWG +WG+NGY+K+ MG+N+C + +  S
Sbjct:  151 REDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN-GVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYFKMEMGKNMCAIATCAS 356          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 91/222 (40.99%), Postives = 127/222 (57.21%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            R++  VT VKDQG CG+CW+F+  GALE  + +    L+ L+EQQLVDCD           D GC+GGL+++A+E I+  GGVE+E DYPY       C     K A  V N +  +   E+++   L   GP+A+ ++AV +  Y GGV   +     L+H VL+VGYG            PYW IKNSWG ++GENGY +I  G N CG+ + ++S A I
Sbjct:  133 RNYNKVTSVKDQGMCGACWAFAGLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAV-RLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGV-ISFCENNGLNHAVLLVGYGIE-------NNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGMINELASSAQI 336          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 164.081 bits (414), Expect = 9.112e-40
Identity = 92/220 (41.82%), Postives = 127/220 (57.73%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVD    C  E+YG  + GCNGG M +AF+YI+   G++ +  YPY   D   C++D    AA  S ++ +    ED +   +   GP++VG++A       Y  GV     C + ++HGVL+VGYG           K YW++KNSWG N+GE GY ++   + N CG+ S  S
Sbjct:  122 REKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVD----CSTEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMD-QKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQNVNHGVLVVGYGD-------LNGKEYWLVKNSWGHNFGEEGYIRMARNKGNHCGIASFPS 327          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATS_CANFA1.406e-4042.27Cathepsin S OS=Canis familiaris GN=CTSS PE=2 SV=1[more]
CATL1_SHEEP1.406e-4044.70Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]
CATL2_HUMAN1.836e-4042.99Cathepsin L2 OS=Homo sapiens GN=CTSL2 PE=1 SV=2[more]
CATV_NPVHC2.398e-4038.81Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
ORYA_ORYSJ3.132e-4041.10Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
CATV_NPVHZ5.342e-4041.78Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSP3_SOLLC6.977e-4042.53Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
ALEU_HORVU6.977e-4042.60Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATV_NPVMC9.112e-4040.99Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATS_HUMAN9.112e-4041.82Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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