CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.554e-39
Identity = 94/217 (43.32%), Postives = 121/217 (55.76%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 677
            R  GAVTGVKDQG CGSCW+FS   ++EG + + TGELVSLSEQ+LVDCD         S + GCNGGLM+ AFE+I K  G+  E  YPY   DG       +    ++     + ++ +      V + P++V I A     Q Y  GV     CG  LDHGV IVGYG++           YWI+KNSWGE WGE+GY ++  G    R  CG+
Sbjct:  137 RAKGAVTGVKDQGQCGSCWAFSTIASVEGINQIKTGELVSLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIQK-NGITTEDSYPYAEQDGTCASNLLNSPVVSIDGHQDVPANNENALMQAVANQPISVSIEASGYGFQFYSEGVFTGR-CGTELDHGVAIVGYGATR------DGTKYWIVKNSWGEEWGESGYIRMQRGISDKRGKCGI 337          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.462e-39
Identity = 88/222 (39.64%), Postives = 128/222 (57.66%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            R    +T VKDQG CG+CW F++ GALE  + +    L+ LSEQQLVDCD           D GC+GGL+++A+E I+K GGVE+E DY Y   +   C     K A  V N +  +  +E+++   L   GP+A+ ++AV +  Y GG+   +     L+H VL+VGYG            PYWIIKNSWG ++GE+GY ++  G N CG+ + ++S A +
Sbjct:  133 RSMNKITSVKDQGMCGACWRFASLGALESQYAIKYDRLIDLSEQQLVDCDF---------VDMGCDGGLIHTAYEQIMKMGGVEQEFDYSYK-AERQPCALKPHKFATGVRNCYRYVILNEERLEDLLRYVGPIAIAVDAVDLTDYYGGI-VSFCENNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGMINELASSAQV 336          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.522e-39
Identity = 96/217 (44.24%), Postives = 124/217 (57.14%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            VT VK+QG+CGSCW+FS TGALE A  ++TG+L  L+EQQLVDC    +       + GC GGL + AFEYI    G+  E  YPY G D G CK+  SK  A V + + I+ +DE+ M   +  H P+  A  + A +M  Y  G+     C K  D   H VL VGYG         K  PYWI+KNSWG NWG  GY+ I  G+N+CG+ +  S
Sbjct:  129 VTPVKNQGSCGSCWTFSTTGALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIMGEDTYPYRGQD-GDCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACAS 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.906e-39
Identity = 80/204 (39.22%), Postives = 121/204 (59.31%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            R+ G + GVKDQG+CGSCW+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++K GG++ E+DYPY   +G   ++ K+     + ++  +  + ++     V H P+++ + A     Q Y  G+     CG  +DHGV+I GYG+            YWI++NSWG N  ENGY ++
Sbjct:   25 REKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGIDTEEDYPYKERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGGRDFQHYKSGIFTGK-CGTAVDHGVVIAGYGTE-------NGMDYWIVRNSWGANCRENGYLRV 212          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.714e-39
Identity = 83/218 (38.07%), Postives = 127/218 (58.26%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            VT VK+QG CG+CW+F+  G+LE    +   EL++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I   E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I+
Sbjct:  124 VTSVKNQGMCGACWAFATLGSLESQFAIKHNELINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYIIVYEEKLKDLLPLVGPIPMAIDAADIVNYKQGI-IKYCFDSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSEP_VIGMU (Vignain OS=Vigna mungo PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 94/224 (41.96%), Postives = 126/224 (56.25%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 692
            R  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD E         + GCNGGLM SAFE+I + GG+  E +YPYT  +G   +   + +A ++     +  +++      V + P++V I+A     Q Y  GV     C   L+HGV IVGYG++           YWI++NSWG  WGE GY  I M RN+      CG+  M S
Sbjct:  135 RKKGAVTDVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYTAQEGTCDESKVNDLAVSIDGHENVPVNDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCNTDLNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEQGY--IRMQRNISKKEGLCGIAMMAS 341          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVLD (Viral cathepsin OS=Lymantria dispar multicapsid nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 83/225 (36.89%), Postives = 130/225 (57.78%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSK--IAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAI 707
            R+   VT +K+QGACG+CW+F+   ++E    +    L+ LSEQQL+DCD         S D GCNGGL+++AFE I++ GGV+ E DYP+ G +   C  D+ +  + + V  +  +  +E+++   L   GP+ + I+A  +  Y  GV  SC       L+H VL+VGYG            PYW+ KN+WG++WGENGY+++    N CG+ + ++S A +
Sbjct:  151 REQNKVTSIKNQGACGACWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEIMRMGGVQTELDYPFVGRN-RRCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWVFKNTWGDDWGENGYFRVRQNVNACGMVNDLASTAVL 355          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 1.007e-38
Identity = 91/215 (42.33%), Postives = 123/215 (57.21%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQ--TYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 677
            R+ G VT VK QGACGSCW+FSA GALE    L TG+LVSLS Q LVD    C   +YG  + GCNGG M  AF+YI+   G++ E  YPY   D G C++D    AA  S +  +    E+ +   +   GP++VGI+A       Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++     N CG+
Sbjct:  122 REKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVD----CSTAKYG--NKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMD-GKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQNVNHGVLVVGYGN-------LDGKDYWLVKNSWGLHFGDQGYIRMARNSGNHCGI 322          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.718e-38
Identity = 88/224 (39.29%), Postives = 130/224 (58.04%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 692
            R  GAV  +K+Q  CGSCW+FSA  A+E  + + TG+L+SLSEQ+LVDCD         +   GCNGG MN+AF+YI+  GG++ +++YPY+    GSCK  + ++  +++ F  ++ + +    + V   P++V + A     Q Y  G+     CG   +HGV+IVGYG+          K YWI++NSWG+NWG  GY  I M RNV      CG+  + S
Sbjct:    8 RSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCD---------TASHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAVQ-GSCKPYRLRV-VSINGFQRVTRNNESALQSAVASQPVSVTVEAAGAPFQHYSSGIFTG-PCGTAQNHGVVIVGYGTQ-------SGKNYWIVRNSWGQNWGNQGY--IWMERNVASSAGLCGIAQLPS 210          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.244e-38
Identity = 85/223 (38.12%), Postives = 126/223 (56.50%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            R    +T VK+QG CG+CW+F+   +LE    ++   L++LSEQQ++DCD         S D GC GGL+++AFE I+  GGV+ E DYPY  ++   C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG            PYWI+KNSWG +WGE G++KI    N CG+ + ++S A I+
Sbjct:  119 RRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNN-YCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGI-IKYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGEQGFFKIQQNVNACGIKNELASTAEIN 323          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CYSP_HEMSP1.554e-3943.32Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]
CATV_NPVSE3.462e-3939.64Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATH_BOVIN4.522e-3944.24Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CYSPL_SOLLC5.906e-3939.22Low-temperature-induced cysteine proteinase (Fragm... [more]
CATV_NPVBM7.714e-3938.07Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CYSEP_VIGMU1.007e-3841.96Vignain OS=Vigna mungo PE=1 SV=1[more]
CATV_NPVLD1.007e-3836.89Viral cathepsin OS=Lymantria dispar multicapsid nu... [more]
CATS_BOVIN1.007e-3842.33Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
ERVB_TABDI1.718e-3839.29Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATV_NPVEP2.244e-3838.12Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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